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L2_019_119G1_scaffold_762

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_762_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1011)
DNA (1011bp) protein (337aa)
pgk; Phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Phosphoglycerate kinase n=4 Tax=Bifidobacterium breve RepID=F6C9H9_BIFBA
L2_019_119G1_scaffold_762_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1170..2036)
DNA (867bp) protein (289aa)
Putative sporulation transcription regulator WhiA n=6 Tax=Bifidobacterium breve RepID=F6C9I0_BIFBA
Hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_019_119G1_scaffold_762_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2277..3242)
DNA (966bp) protein (322aa)
UPF0042 nucleotide-binding protein HMPREF9228_0870 n=3 Tax=Bifidobacterium breve RepID=F6C9I1_BIFBA
hypothetical protein
Nucleotide-binding protein BIFBRE_03984 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_019_119G1_scaffold_762_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3242..4222)
DNA (981bp) protein (327aa)
Shikimate dehydrogenase substrate binding domain protein n=2 Tax=Bifidobacterium breve RepID=F6C9I2_BIFBA
Shikimate 5-dehydrogenase
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:AHJ21157.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_019_119G1_scaffold_762_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4458..6875)
DNA (2418bp) protein (806aa)
UvrABC system protein C n=2 Tax=Bifidobacterium breve RepID=F6C9I4_BIFBA
Excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_019_119G1_scaffold_762_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7029..8597)
DNA (1569bp) protein (523aa)
UvrABC system protein A n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BPH1_BIFBR
Excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_019_119G1_scaffold_762_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8606..9868)
DNA (1263bp) protein (421aa)
UvrABC system protein A n=3 Tax=Bifidobacterium breve RepID=F6C9I5_BIFBA
Excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_019_119G1_scaffold_762_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10064..11254
DNA (1191bp) protein (397aa)
Aminotransferase (EC:2.6.1.-)
Aminotransferase, class I/II {ECO:0000313|EMBL:EFE89557.1}; EC=2.6.1.- {ECO:0000313|EMBL:EFE89557.1};; Aspartate aminotransferase {ECO:0000313|EMBL:BAQ99976.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Aminotransferase, class I/II n=6 Tax=Bifidobacterium breve RepID=F6C9I6_BIFBA
L2_019_119G1_scaffold_762_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11499..11807
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CQ20_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI86158.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L2_019_119G1_scaffold_762_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11785..12144
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2DWX7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI86157.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ABC transporter permease
L2_019_119G1_scaffold_762_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12144..12563
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E1L8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI86156.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ATP-binding protein of ABC transporter system
L2_019_119G1_scaffold_762_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12518..12844
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZEB2_BIFBR
ATP-binding protein of ABC transporter system
Uncharacterized protein {ECO:0000313|EMBL:BAQ99973.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_019_119G1_scaffold_762_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12910..13617)
DNA (708bp) protein (236aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=5 Tax=Bifidobacterium breve RepID=F6C9I7_BIFBA
Hypothetical protein with short chain dehydrogenase domain
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:AEF26696.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_019_119G1_scaffold_762_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13679..15280)
DNA (1602bp) protein (534aa)
ABC transporter, ATP-binding protein n=3 Tax=Bifidobacterium breve RepID=F6C9I8_BIFBA
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI86153.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_019_119G1_scaffold_762_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15452..17215
DNA (1764bp) protein (588aa)
Carbohydrate kinase family protein n=3 Tax=Bifidobacterium breve RepID=H3KYA2_BIFBR
Sugar kinase
Putative YjeF domain protein {ECO:0000313|EMBL:ERI86151.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_019_119G1_scaffold_762_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17406..18035
DNA (630bp) protein (210aa)
HAD hydrolase, family IA, variant 3 n=6 Tax=Bifidobacterium breve RepID=F6C9J0_BIFBA
Haloacid dehalogenase-like hydrolase (HAD superfamily)
HAD hydrolase, family IA {ECO:0000313|EMBL:EPD75092.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_019_119G1_scaffold_762_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18076..18894
DNA (819bp) protein (273aa)
Transcriptional regulator, LysR family n=6 Tax=Bifidobacterium breve RepID=F6C9J1_BIFBA
Transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABE95664.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_019_119G1_scaffold_762_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19018..20139)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C9J2_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI86148.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_019_119G1_scaffold_762_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20309..20497)
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C9J3_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE89544.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_019_119G1_scaffold_762_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20604..21299)
DNA (696bp) protein (232aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Orotate phosphoribosyltransferase n=6 Tax=Bifidobacterium breve RepID=F6C9J4_BIFBA
Orotate phosphoribosyltransferase
L2_019_119G1_scaffold_762_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21303..22274)
DNA (972bp) protein (324aa)
dihydroorotate dehydrogenase 1B (EC:1.3.98.1)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Dihydroorotate dehydrogenase n=2 Tax=Bifidobacterium breve RepID=F6C9J5_BIFBA
L2_019_119G1_scaffold_762_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22277..23119)
DNA (843bp) protein (281aa)
Oxidoreductase NAD-binding domain protein n=2 Tax=Bifidobacterium breve RepID=F6C9J6_BIFBA
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:ERI86144.1}; Flags: Fragment;; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Dihydroorotate dehydrogenase electron transfer subunit
L2_019_119G1_scaffold_762_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23254..24207)
DNA (954bp) protein (318aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Orotidine 5'-phosphate decarboxylase n=2 Tax=Bifidobacterium breve RepID=F6C9J7_BIFBA
Orotidine 5'-phosphate decarboxylase
L2_019_119G1_scaffold_762_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24225..25739)
DNA (1515bp) protein (505aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Dihydroorotase n=2 Tax=Bifidobacterium breve PF2_BIFBR">RepID=D4BPF2_BIFBR
Dihydroorotase
L2_019_119G1_scaffold_762_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25736..26155)
DNA (420bp) protein (140aa)
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein {ECO:0000313|EMBL:AEF26924.1}; EC=2.1.3.2 {ECO:0000313|EMBL:AEF26924.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein n=6 Tax=Bifidobacterium breve RepID=F6C9J9_BIFBA
Aspartate carbamoyltransferase
L2_019_119G1_scaffold_762_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26155..26235)
DNA (81bp) protein (27aa)
pyrB; Aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Aspartate carbamoyltransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU59_BIFLJ
Displaying 26 items

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