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L2_019_244G1_scaffold_1039

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_1039_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..322
DNA (321bp) protein (107aa)
30S ribosomal protein S1 n=13 Tax=Bifidobacterium longum RepID=D6D971_BIFLN
30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:EEI81011.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_019_244G1_scaffold_1039_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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496..1113
DNA (618bp) protein (206aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Dephospho-CoA kinase n=7 Tax=Bifidobacterium longum RepID=D6D970_BIFLN
dephospho-CoA kinase
L2_019_244G1_scaffold_1039_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1125..3236
DNA (2112bp) protein (704aa)
UvrABC system protein B n=14 Tax=Bifidobacterium RepID=D6D969_BIFLN
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Excinuclease ABC subunit B
L2_019_244G1_scaffold_1039_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3405..4391
DNA (987bp) protein (329aa)
Membrane protein TerC, possibly involved in tellurium resistance n=18 Tax=Bifidobacterium RepID=D6D968_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24797.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_019_244G1_scaffold_1039_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4559..6001
DNA (1443bp) protein (481aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Pyruvate kinase n=13 Tax=Bifidobacterium RepID=Q8G5M1_BIFLO
pykF; pykf
L2_019_244G1_scaffold_1039_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6149..6748)
DNA (600bp) protein (200aa)
Possible NTP pyrophosphatase in MutT family n=18 Tax=Bifidobacterium RepID=Q8G5M2_BIFLO
NTP pyrophosphatase
Possible NTP pyrophosphatase in MutT family {ECO:0000313|EMBL:AAN24795.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_019_244G1_scaffold_1039_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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6941..7696
DNA (756bp) protein (252aa)
AmiR n=14 Tax=Bifidobacterium RepID=E4QZD4_BIFLM
two-component response regulator
Chemotaxis protein CheY {ECO:0000313|EMBL:KEY32726.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_244G1_scaffold_1039_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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7742..10609
DNA (2868bp) protein (956aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I {ECO:0000313|EMBL:CBK70717.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBK70717.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
DNA polymerase I n=3 Tax=Bifidobacterium longum RepID=B3DSR5_BIFLD
L2_019_244G1_scaffold_1039_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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10779..11699
DNA (921bp) protein (307aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Putative GTP cyclohydrolase 1 type 2 n=3 Tax=Bifidobacterium longum RepID=E8MHQ2_BIFL2
hypothetical protein
L2_019_244G1_scaffold_1039_10
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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11745..12419
DNA (675bp) protein (225aa)
NUDIX hydrolase n=6 Tax=Bifidobacterium RepID=B7GSY6_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95810.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_019_244G1_scaffold_1039_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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12493..14418
DNA (1926bp) protein (642aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Glycogen debranching enzyme GlgX n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GTY0_BIFLN
glgX1; glycogen operon protein glgX
L2_019_244G1_scaffold_1039_12
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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14556..14756
DNA (201bp) protein (67aa)
SoxR-type transcriptional regulator n=4 Tax=Bacteria RepID=B3DSR1_BIFLD
transcriptional regulator
SoxR-type transcriptional regulator {ECO:0000313|EMBL:EFV38086.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_244G1_scaffold_1039_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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14905..14988
DNA (84bp) protein (28aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTJ4_BIFLJ
hypothetical protein
Zinc ribbon domain protein {ECO:0000313|EMBL:EIJ23168.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Displaying 13 items

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