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L2_019_244G1_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_56_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..962
DNA (960bp) protein (320aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LYT7_9FIRM
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CBL22790.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_019_244G1_scaffold_56_2
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1073..1954
DNA (882bp) protein (294aa)
Carbohydrate ABC transporter membrane protein 1 CUT1 family n=1 Tax=Blautia sp. CAG:237 RepID=R6KRA1_9FIRM
Carbohydrate ABC transporter membrane protein 1 CUT1 family {ECO:0000313|EMBL:CDB77793.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
CUT1 family carbohydrate ABC transporter membrane protein 1
L2_019_244G1_scaffold_56_3
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1955..2773
DNA (819bp) protein (273aa)
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) n=1 Tax=Blautia sp. CAG:237 RepID=R6LUU0_9FIRM
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDB77792.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_019_244G1_scaffold_56_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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2786..5023
DNA (2238bp) protein (746aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33035.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
alpha-L-fucosidase
L2_019_244G1_scaffold_56_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5070..6155)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33042.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
oxidoreductase domain-containing protein
L2_019_244G1_scaffold_56_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6438..6587
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1Y2_RUMGN
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
50S ribosomal protein L33
L2_019_244G1_scaffold_56_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6609..6818
DNA (210bp) protein (70aa)
Protein translocase subunit SecE n=2 Tax=Clostridiales RepID=A7B1Y3_RUMGN
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
protein translocase subunit secE/sec61 gamma
L2_019_244G1_scaffold_56_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6845..7363
DNA (519bp) protein (173aa)
Transcription termination/antitermination protein NusG n=4 Tax=Clostridiales RepID=A7B1Y4_RUMGN
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcription antitermination protein nusG
L2_019_244G1_scaffold_56_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7417..7842
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=3 Tax=Clostridiales RepID=A7B1Y5_RUMGN
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
LSU ribosomal protein L11P
L2_019_244G1_scaffold_56_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8001..8693
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=4 Tax=Clostridiales RepID=A7B1Y6_RUMGN
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ribosomal protein L1, bacterial/chloroplast
L2_019_244G1_scaffold_56_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8900..9445
DNA (546bp) protein (182aa)
50S ribosomal protein L10 n=4 Tax=Clostridiales RepID=A7B1Y7_RUMGN
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
rplJ; 50S ribosomal protein L10
L2_019_244G1_scaffold_56_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9555..9932
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RWY1_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
LSU ribosomal protein L12P
L2_019_244G1_scaffold_56_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10213..14070
DNA (3858bp) protein (1286aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=2 Tax=Clostridiales RepID=R5UAW2_9FIRM
L2_019_244G1_scaffold_56_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14085..15398
DNA (1314bp) protein (438aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHL6_9FIRM
L2_019_244G1_scaffold_56_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15440..17596
DNA (2157bp) protein (719aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1Z1_RUMGN
L2_019_244G1_scaffold_56_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17763..18428
DNA (666bp) protein (222aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5TR83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN46802.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted membrane protein
L2_019_244G1_scaffold_56_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18508..18657)
DNA (150bp) protein (50aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B1Z3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46801.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_019_244G1_scaffold_56_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18781..19218)
DNA (438bp) protein (146aa)
Response regulator receiver domain protein n=4 Tax=Clostridiales RepID=A7B1Z5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19387.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
winged helix family two component transcriptional regulator
L2_019_244G1_scaffold_56_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19279..19494)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN46800.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
winged helix family two component transcriptional regulator
L2_019_244G1_scaffold_56_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19487..20557)
DNA (1071bp) protein (357aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Lachnospiraceae RepID=A7B1Z6_RUMGN
L2_019_244G1_scaffold_56_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20943..22925
DNA (1983bp) protein (661aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
vacuolar-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TR86_9FIRM
L2_019_244G1_scaffold_56_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23112..24296)
DNA (1185bp) protein (395aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=4 Tax=Clostridiales RepID=A7B1Z8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46797.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_019_244G1_scaffold_56_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24296..25294)
DNA (999bp) protein (333aa)
DNA replication protein DnaC n=4 Tax=Clostridiales RepID=A7B1Z9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19383.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
replicative DNA helicase loader DnaI
L2_019_244G1_scaffold_56_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25310..26374)
DNA (1065bp) protein (355aa)
DnaD domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAX4_9FIRM
DnaD domain protein {ECO:0000313|EMBL:CCZ68316.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
DnaD and phage-associated domain
L2_019_244G1_scaffold_56_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26520..27896)
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B201_RUMGN
L2_019_244G1_scaffold_56_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28155..29429
DNA (1275bp) protein (425aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=3 Tax=Lachnospiraceae RepID=A7B203_RUMGN
L2_019_244G1_scaffold_56_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29447..30544
DNA (1098bp) protein (366aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|SAAS:SAAS00083544}; EC=2.7.7.27 {ECO:0000256|SAAS:SAAS00083544};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ADP-glucose pyrophosphorylase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=4 Tax=Clostridiales RepID=A7B204_RUMGN
L2_019_244G1_scaffold_56_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30560..30874
DNA (315bp) protein (105aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8BW28_RUMGN
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Uncharacterized protein, involved in the regulation of septum location
L2_019_244G1_scaffold_56_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31014..32627
DNA (1614bp) protein (538aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BX41_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19377.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
conserved hypothetical protein
L2_019_244G1_scaffold_56_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32563..33249)
DNA (687bp) protein (229aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BY08_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19376.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Displaying items 1-30 of 91 in total

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