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L2_019_244G1_scaffold_69

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_69_1
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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85..1197
DNA (1113bp) protein (371aa)
IS1557 family transposase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P1G3_BIFBP
Putative transposase {ECO:0000313|EMBL:CDB23194.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
IS1557 family transposase
L2_019_244G1_scaffold_69_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1219..1815)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P1G2_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI81453.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_019_244G1_scaffold_69_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2398..3276)
DNA (879bp) protein (293aa)
Choloylglycine hydrolase n=2 Tax=Bifidobacterium bifidum RepID=E3EM77_BIFBS
cbh; Choloylglycine hydrolase
Choloylglycine hydrolase {ECO:0000313|EMBL:ADO53084.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_244G1_scaffold_69_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3410..3709)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EM76_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53083.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_244G1_scaffold_69_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3997..4869)
DNA (873bp) protein (291aa)
Carbon-nitrogen hydrolase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2LG91_BIFBI
Carbon-nitrogen hydrolase {ECO:0000313|EMBL:EKF16759.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
carbon-nitrogen hydrolase
L2_019_244G1_scaffold_69_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4940..5902)
DNA (963bp) protein (321aa)
ABC transporter ATP-binding protein (EC:3.6.3.25)
ABC transporter ATP-binding protein n=5 Tax=Bifidobacterium bifidum RepID=K2H9N7_BIFBI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKF16760.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_019_244G1_scaffold_69_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5958..7208)
DNA (1251bp) protein (417aa)
Glycosyltransferase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EM73_BIFBS
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:ADO53080.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_244G1_scaffold_69_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7358..7831)
DNA (474bp) protein (158aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WHS8_BIFBI
hypothetical protein
Membrane spanning protein {ECO:0000313|EMBL:KFI42907.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_019_244G1_scaffold_69_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8179..9711)
DNA (1533bp) protein (511aa)
gltD; glutamate synthase small chain GltD (EC:1.4.1.14)
GltD Glutamate synthase [NADPH] small chain n=6 Tax=Bifidobacterium RepID=E4P1F5_BIFBP
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFR50237.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_019_244G1_scaffold_69_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9713..14299)
DNA (4587bp) protein (1529aa)
Glutamate synthase [NADPH], large subunit {ECO:0000313|EMBL:EFR50236.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EFR50236.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
gltB; ferredoxin-dependent glutamate synthase (EC:1.4.7.1)
Glutamate synthase [NADPH], large subunit n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V9E4_BIFBI
L2_019_244G1_scaffold_69_11
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14564..16654)
DNA (2091bp) protein (697aa)
Translation elongation factor n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GPZ8_9BIFI
Translation elongation factor {ECO:0000313|EMBL:CDB23341.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
translation elongation factor
L2_019_244G1_scaffold_69_12
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16851..18419)
DNA (1569bp) protein (523aa)
aminotransferase (EC:2.6.1.1)
Aminotransferase n=2 Tax=Bifidobacterium bifidum RepID=E4P1F2_BIFBP
Aminotransferase {ECO:0000313|EMBL:CDB23338.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_244G1_scaffold_69_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18737..18877
DNA (141bp) protein (47aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=K2HTC9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53074.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_244G1_scaffold_69_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18934..20328)
DNA (1395bp) protein (465aa)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EM66_BIFBS
hemN; oxygen-independent coproporphyrinogen III oxidase
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:ADO53073.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_244G1_scaffold_69_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20343..22223)
DNA (1881bp) protein (627aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
lepA; GTP-binding protein LepA (EC:2.7.7.4)
Elongation factor 4 n=2 Tax=Bifidobacterium bifidum RepID=E3EM65_BIFBS
L2_019_244G1_scaffold_69_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


22432..22692
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=7 Tax=Bifidobacterium RepID=E3EM64_BIFBS
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_019_244G1_scaffold_69_17
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22830..23588)
DNA (759bp) protein (253aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=E4V9D7_BIFBI
hypothetical protein
Conserved hypothetical membrane spanning protein in uncharacterized protein family UPF0126 {ECO:0000313|EMBL:CDB23325.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_244G1_scaffold_69_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23826..24461)
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EM62_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53069.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_244G1_scaffold_69_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24664..25791)
DNA (1128bp) protein (376aa)
ilvE; branched-chain amino acid aminotransferase IlvE (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=5 Tax=Bifidobacterium bifidum RepID=E3EM61_BIFBS
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:ADO53068.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_244G1_scaffold_69_20
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(26007..26633)
DNA (627bp) protein (209aa)
50S ribosomal protein L25 n=2 Tax=Bifidobacterium RepID=R6HAR9_9BIFI
rplY; 50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_244G1_scaffold_69_21
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26948..27940
DNA (993bp) protein (331aa)
Hydrolase of the alpha/beta superfamily protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GPX5_9BIFI
Hydrolase of the alpha/beta superfamily protein {ECO:0000313|EMBL:CDB23316.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_019_244G1_scaffold_69_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28079..29524)
DNA (1446bp) protein (482aa)
pntB; NAD(P) transhydrogenase subunit beta (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
NAD(P) transhydrogenase subunit beta n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EM58_BIFBS
L2_019_244G1_scaffold_69_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29524..29838)
DNA (315bp) protein (105aa)
pntAB; NAD(P) transhydrogenase subunit alpha part 2 (EC:1.6.1.2)
NAD(P) transhydrogenase alpha2 subunit n=7 Tax=Bifidobacterium RepID=E3EM57_BIFBS
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:EKF15071.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_019_244G1_scaffold_69_24
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29842..30981)
DNA (1140bp) protein (380aa)
pntAA; NAD(P) transhydrogenase subunit alpha part 1 (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha subunit n=8 Tax=Bifidobacterium RepID=E3EM56_BIFBS
PntA1 NAD(P) transhydrogenase subunit alpha part 1 {ECO:0000313|EMBL:CDB23312.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_244G1_scaffold_69_25
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31201..33237
DNA (2037bp) protein (679aa)
Long-chain-fatty-acid--CoA ligase n=2 Tax=Bifidobacterium RepID=R6GPX1_9BIFI
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CDB23311.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
fadD3; long-chain-fatty-acid--CoA ligase
L2_019_244G1_scaffold_69_26
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33338..34348)
DNA (1011bp) protein (337aa)
GTPase Era n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P1D8_BIFBP
era; GTP-binding protein
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_244G1_scaffold_69_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34397..35815)
DNA (1419bp) protein (473aa)
Conserved hypothetical membrane spanning protein with CBS and transporter associated domains n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EM53_BIFBS
hypothetical protein
Conserved hypothetical membrane spanning protein with CBS and transporter associated domains {ECO:0000313|EMBL:ADO53060.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_244G1_scaffold_69_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35892..36437)
DNA (546bp) protein (182aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Endoribonuclease YbeY n=8 Tax=Bifidobacterium RepID=E3EM52_BIFBS
putative metalloprotease
L2_019_244G1_scaffold_69_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36434..37519)
DNA (1086bp) protein (362aa)
PhoH PhoH protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P1D5_BIFBP
phoH; PhoH protein
Phosphate starvation-induced protein {ECO:0000313|EMBL:AFL04419.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_019_244G1_scaffold_69_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37528..37866)
DNA (339bp) protein (113aa)
HIT family protein n=6 Tax=Bifidobacterium RepID=E4P1D4_BIFBP
putative HIT family hydrolase
HIT family protein {ECO:0000313|EMBL:KFI42884.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Displaying items 1-30 of 70 in total

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