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L2_019_244G1_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_88_1
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

250..1098
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Streptococcus anginosus RepID=S6B817_STRAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EID23452.1}; TaxID=1095729 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus anginosus subsp. whileyi CCUG 39159.;"
L2_019_244G1_scaffold_88_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1235..1780
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZF8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48529.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Uncharacterized protein conserved in cyanobacteria
L2_019_244G1_scaffold_88_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1957..2121
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYG0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48530.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Phage integrase family.
L2_019_244G1_scaffold_88_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2118..2618
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYG0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48530.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Phage integrase family.
L2_019_244G1_scaffold_88_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2605..2862
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYG0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20154.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Phage integrase family.
L2_019_244G1_scaffold_88_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3114..4208
DNA (1095bp) protein (365aa)
Transcriptional regulator, AraC family n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8J0_RUMGN
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDN75760.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
AraC family transcriptional regulator
L2_019_244G1_scaffold_88_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4375..6321
DNA (1947bp) protein (649aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BPE2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16690.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L2_019_244G1_scaffold_88_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6378..7247)
DNA (870bp) protein (290aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TP81_9FIRM
L2_019_244G1_scaffold_88_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7284..7952)
DNA (669bp) protein (223aa)
Phosphatidylserine synthase (EC:2.7.8.8)
CDP-alcohol phosphatidyltransferase n=4 Tax=Clostridiales RepID=A7B8I7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49318.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_019_244G1_scaffold_88_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7949..9010)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TPK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD16693.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_019_244G1_scaffold_88_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9000..9710)
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BNI6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49320.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PAP2 superfamily.
L2_019_244G1_scaffold_88_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9929..12019)
DNA (2091bp) protein (697aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=4 Tax=Clostridiales RepID=A7B8B9_RUMGN
L2_019_244G1_scaffold_88_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12239..12505)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=4 Tax=Clostridiales RepID=A7B8B8_RUMGN
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
SSU ribosomal protein S15P
L2_019_244G1_scaffold_88_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12632..13939)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TW81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49324.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
putative glycosyl hydrolase
L2_019_244G1_scaffold_88_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13942..15201)
DNA (1260bp) protein (420aa)
Oxidoreductase, NAD-binding domain protein n=4 Tax=Clostridiales RepID=A7B8B6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16698.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
oxidoreductase
L2_019_244G1_scaffold_88_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15217..16080)
DNA (864bp) protein (288aa)
ABC transporter, permease protein n=4 Tax=Clostridiales RepID=A7B8B5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49326.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
sugar ABC transporter permease
L2_019_244G1_scaffold_88_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16080..17000)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UFH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67562.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
putative ABC-type sugar transport system, permease component
L2_019_244G1_scaffold_88_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17089..18414)
DNA (1326bp) protein (442aa)
ABC transporter, solute-binding protein n=4 Tax=Clostridiales RepID=A7B8B3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49328.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC transporter binding protein
L2_019_244G1_scaffold_88_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18640..19896)
DNA (1257bp) protein (419aa)
ABC transporter, solute-binding protein n=4 Tax=Clostridiales RepID=A7B8B2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49329.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
extracellular solute-binding protein
L2_019_244G1_scaffold_88_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19893..20963)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TPL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49330.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
chemotaxis protein CheY
L2_019_244G1_scaffold_88_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20951..22699)
DNA (1749bp) protein (583aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Clostridiales RepID=A7B8B0_RUMGN
helicase Ski2
L2_019_244G1_scaffold_88_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22708..23607)
DNA (900bp) protein (300aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2 2.7.1.26)
Riboflavin biosynthesis protein RibF n=4 Tax=Clostridiales RepID=A7B8A9_RUMGN
L2_019_244G1_scaffold_88_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23610..24530)
DNA (921bp) protein (307aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
tRNA pseudouridine synthase B (EC:4.2.1.70 5.4.99.12)
tRNA pseudouridine synthase B n=4 Tax=Clostridiales RepID=A7B8A8_RUMGN
L2_019_244G1_scaffold_88_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24552..25511)
DNA (960bp) protein (320aa)
DHHA1 domain protein n=4 Tax=Clostridiales RepID=A7B8A7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16707.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Exopolyphosphatase-related proteins
L2_019_244G1_scaffold_88_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25518..25889)
DNA (372bp) protein (124aa)
Ribosome-binding factor A n=2 Tax=Lachnospiraceae RepID=F7JUK8_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ribosome-binding factor A
L2_019_244G1_scaffold_88_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25899..28466)
DNA (2568bp) protein (856aa)
Translation initiation factor IF-2 n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BNK2_RUMGN
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
bacterial translation initiation factor 2 (bIF-2)
L2_019_244G1_scaffold_88_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28483..28806)
DNA (324bp) protein (108aa)
Ribosomal protein L7Ae n=2 Tax=Clostridiales RepID=A7B8A4_RUMGN
Ribosomal protein L7Ae {ECO:0000313|EMBL:CCZ67572.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ribosomal protein L7Ae/L30e/S12e/Gadd45
L2_019_244G1_scaffold_88_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28793..29071)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TP96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67573.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_019_244G1_scaffold_88_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29094..30281)
DNA (1188bp) protein (396aa)
Transcription termination factor NusA n=4 Tax=Clostridiales RepID=A7B8A2_RUMGN
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcription termination factor NusA
L2_019_244G1_scaffold_88_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30301..30768)
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=4 Tax=Clostridiales RepID=A7B8A1_RUMGN
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
Displaying items 1-30 of 60 in total

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