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L2_019_244G1_scaffold_95

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_95_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..449
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMA7_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53343.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_244G1_scaffold_95_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1217..2230)
DNA (1014bp) protein (338aa)
Transcriptional regulator containing cell envelope-related transcriptional attenuator domain n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPS9_BIFBS
transcriptional regulator containing cell envelope-related transcriptional attenuator domain
Transcriptional regulator containing cell envelope-related transcriptional attenuator domain {ECO:0000313|EMBL:ADO52616.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_244G1_scaffold_95_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2179..2565)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPT0_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52617.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_244G1_scaffold_95_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2982..4478
DNA (1497bp) protein (499aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZS9_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE50036.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_019_244G1_scaffold_95_5
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4691..5686)
DNA (996bp) protein (332aa)
Conserved hypothetical secreted protein with G5 domain n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZT0_BIFBP
hypothetical protein
Conserved hypothetical secreted protein with G5 domain {ECO:0000313|EMBL:CDB22127.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_244G1_scaffold_95_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5919..6281)
DNA (363bp) protein (121aa)
thioredoxin (EC:1.8.1.8)
Thioredoxin n=4 Tax=Bifidobacterium bifidum RepID=E4NZT1_BIFBP
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_019_244G1_scaffold_95_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6479..7105
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V810_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR49752.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_019_244G1_scaffold_95_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7251..8105
DNA (855bp) protein (285aa)
Hydrolase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IM89_BIFBI
Hydrolase {ECO:0000313|EMBL:EKE49875.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hydrolase
L2_019_244G1_scaffold_95_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8219..9310
DNA (1092bp) protein (364aa)
phosphohydrolase (EC:3.6.1.22)
Hydrolase, NUDIX family n=2 Tax=Bifidobacterium bifidum RepID=E4V812_BIFBI
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFR49754.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_019_244G1_scaffold_95_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9388..11238
DNA (1851bp) protein (617aa)
ErfK/YbiS/YcfS/YnhG n=2 Tax=Bifidobacterium bifidum RepID=E4V813_BIFBI
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EFR49755.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_019_244G1_scaffold_95_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11386..11793
DNA (408bp) protein (136aa)
Glycine cleavage system H protein n=6 Tax=Bifidobacterium bifidum RepID=E3EPT8_BIFBS
gcvH; glycine cleavage system H protein GcvH
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_019_244G1_scaffold_95_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11921..13270
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HWF3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50772.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_019_244G1_scaffold_95_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13326..15788
DNA (2463bp) protein (821aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EFR49758.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFR49758.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
ptrB; protease II PtrB (EC:3.4.21.83)
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V816_BIFBI
L2_019_244G1_scaffold_95_14
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16271..17302
DNA (1032bp) protein (344aa)
3-isopropylmalate dehydrogenase n=6 Tax=Bifidobacterium RepID=E3EPU2_BIFBS
leuB; 3-isopropylmalate dehydrogenase
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:CDB22815.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_244G1_scaffold_95_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18061..18699
DNA (639bp) protein (213aa)
LplA Lipoate-protein ligase A {ECO:0000313|EMBL:KFI42480.1}; EC=2.7.7.63 {ECO:0000313|EMBL:KFI42480.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Biotin/lipoate A/B protein ligase family protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DR70_BIFBI
lplA; Lipoate-protein ligase A
L2_019_244G1_scaffold_95_16
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18863..19582
DNA (720bp) protein (240aa)
transcription regulator, crp family (EC:3.1.1.5)
Transcription regulator, crp family n=6 Tax=Bifidobacterium RepID=E4NZU1_BIFBP
Transcription regulator crp family {ECO:0000313|EMBL:CDB22396.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_244G1_scaffold_95_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19757..22066
DNA (2310bp) protein (770aa)
pbp; penicillin-binding protein Pbp (EC:2.4.1.129)
Pbp Penicillin-binding protein n=2 Tax=Bifidobacterium bifidum RepID=E4NZU2_BIFBP
Penicillin-binding protein Pbp {ECO:0000313|EMBL:EKE50777.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_019_244G1_scaffold_95_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22354..23487
DNA (1134bp) protein (378aa)
baiC; NADH-dependent flavin oxidoreductase BaiC (EC:1.6.99.1)
BaiC NADH-dependent flavin oxidoreductase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZU3_BIFBP
NADH-dependent flavin oxidoreductase BaiC {ECO:0000313|EMBL:EKE51564.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_019_244G1_scaffold_95_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23557..24714)
DNA (1158bp) protein (386aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Dihydroorotate dehydrogenase n=8 Tax=Bifidobacterium RepID=E3ELT8_BIFBS
pyrD2; dihydroorotate dehydrogenase
L2_019_244G1_scaffold_95_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24908..25711
DNA (804bp) protein (268aa)
Transcriptional regulator, DeoR family n=7 Tax=Bifidobacterium RepID=E3ELT9_BIFBS
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EFR49766.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_019_244G1_scaffold_95_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25999..26829
DNA (831bp) protein (277aa)
galT; galactose-1-phosphate uridylyl transferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=6 Tax=Bifidobacterium RepID=E3ELU0_BIFBS
Galactose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:ADO52636.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_244G1_scaffold_95_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26919..28169
DNA (1251bp) protein (417aa)
Galactokinase n=8 Tax=Bifidobacterium RepID=E3ELU1_BIFBS
galK; galactokinase
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_019_244G1_scaffold_95_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28387..29712)
DNA (1326bp) protein (442aa)
Transporter, major facilitator superfamily MFS1, alpha-ketoglutarate permease n=5 Tax=Bifidobacterium RepID=E3ELU2_BIFBS
kgtP; transporter major facilitator superfamily MFS1, alpha-ketoglutarate permease
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERI82055.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_019_244G1_scaffold_95_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30089..30361
DNA (273bp) protein (91aa)
UPF0237 protein BBIF_0434 n=8 Tax=Bifidobacterium RepID=E3ELU3_BIFBS
hypothetical protein
UPF0237 protein BBIF_0434 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_244G1_scaffold_95_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30381..31745
DNA (1365bp) protein (455aa)
UPF0210 protein BBIF_0435 n=5 Tax=Bifidobacterium bifidum RepID=E3ELU4_BIFBS
hypothetical protein
UPF0210 protein B217_02695 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_019_244G1_scaffold_95_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32393..32857
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2BV40_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI42491.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L2_019_244G1_scaffold_95_27
unknown

Not on your lists

comp(33029..33655)
DNA (627bp) protein (209aa)

This feature has no annotations

L2_019_244G1_scaffold_95_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34080..34727)
DNA (648bp) protein (216aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELU6_BIFBS
RNA methyltransferase
L2_019_244G1_scaffold_95_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34889..35641
DNA (753bp) protein (251aa)
F5/8 type C domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CDH0_BIFBI
F5/8 type C domain protein {ECO:0000313|EMBL:ERI82063.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ97613.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
coagulation factor 5/8 type domain
L2_019_244G1_scaffold_95_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35686..36150
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELU8_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52644.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Displaying items 1-30 of 76 in total

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