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L2_019_244G1_scaffold_191

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_191_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..105)
DNA (105bp) protein (35aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTJ4_BIFLJ
hypothetical protein
Zinc ribbon domain protein {ECO:0000313|EMBL:EIJ23168.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_244G1_scaffold_191_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(108..611)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EAW5_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ55239.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_019_244G1_scaffold_191_3
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

612..1145
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GFK4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB23190.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_019_244G1_scaffold_191_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1248..1982)
DNA (735bp) protein (245aa)
putative hydrolase or phosphatase (EC:3.1.3.5)
Putative hydrolase or phosphatase {ECO:0000313|EMBL:AFL04501.1}; EC=3.1.3.5 {ECO:0000313|EMBL:AFL04501.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Putative hydrolase or phosphatase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHY8_BIFBI
L2_019_244G1_scaffold_191_5
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1993..2340)
DNA (348bp) protein (116aa)
RNA polymerase-binding protein RbpA n=7 Tax=Bifidobacterium RepID=E3EP26_BIFBS
hypothetical protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_244G1_scaffold_191_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2464..5022)
DNA (2559bp) protein (853aa)
Helicase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2H7R8_BIFBI
Helicase {ECO:0000313|EMBL:EKE50061.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
helY; putative helicase
L2_019_244G1_scaffold_191_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5131..5457)
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2MD50_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF15272.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L2_019_244G1_scaffold_191_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5462..7399)
DNA (1938bp) protein (646aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=K2I5N0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE50059.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_019_244G1_scaffold_191_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7537..9003)
DNA (1467bp) protein (489aa)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V9R1_BIFBI
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:EFR50353.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
ugpA; UTP--glucose-1-phosphate uridylyltransferase
L2_019_244G1_scaffold_191_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9701..10192
DNA (492bp) protein (164aa)
aldo/keto reductase n=1 Tax=Bifidobacterium bifidum RepID=UPI0001976780
Putative 2,5-diketo-D-gluconic acid reductase B {ECO:0000313|EMBL:EFR50352.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Aldo/keto diketogulonate reductase
L2_019_244G1_scaffold_191_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10236..10997)
DNA (762bp) protein (254aa)
Carboxymuconolactone decarboxylase n=2 Tax=Bifidobacterium bifidum RepID=E4NWW4_BIFBP
carboxymuconolactone decarboxylase
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EKE50673.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_019_244G1_scaffold_191_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11300..13096
DNA (1797bp) protein (599aa)
Sugar kinase n=4 Tax=Bifidobacterium bifidum RepID=E4NWW3_BIFBP
sugar kinase
Putative YjeF domain protein {ECO:0000313|EMBL:EFR50350.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_019_244G1_scaffold_191_13
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13257..13886
DNA (630bp) protein (210aa)
HAD hydrolase, family IA, variant 3 n=4 Tax=Bifidobacterium RepID=E4V9Q7_BIFBI
putative alpha beta hydrolase
Putative alpha beta hydrolase {ECO:0000313|EMBL:CDB22102.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_244G1_scaffold_191_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14094..15026
DNA (933bp) protein (311aa)
Transcriptional regulator, LysR family n=8 Tax=Bifidobacterium RepID=E3EP16_BIFBS
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFI43017.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_019_244G1_scaffold_191_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15080..15580)
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2LEY8_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82955.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_019_244G1_scaffold_191_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15717..16283)
DNA (567bp) protein (189aa)
Transcriptional regulator, TetR family n=2 Tax=Bifidobacterium bifidum RepID=U2BXK7_BIFBI
Transcriptional regulator {ECO:0000313|EMBL:BAQ98167.1}; Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERI82954.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
ybjK; putative HTH-type transcriptional regulator
L2_019_244G1_scaffold_191_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16393..16599)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2M281_BIFBI
ABC transporter ATPase {ECO:0000313|EMBL:KFI43014.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L2_019_244G1_scaffold_191_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16596..16874)
DNA (279bp) protein (93aa)
Trans-aconitate methyltransferase (EC:2.1.1.144)
Putative Trans-aconitate methyltransferase {ECO:0000313|EMBL:KFI43013.1}; EC=2.1.1.144 {ECO:0000313|EMBL:KFI43013.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Predicted Trans-aconitate methyltransferase n=2 Tax=Bifidobacterium RepID=E4NWV8_BIFBP
L2_019_244G1_scaffold_191_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16896..17195
DNA (300bp) protein (100aa)
Transcriptional regulator n=4 Tax=Bifidobacterium RepID=I3WHX3_BIFBI
Toxin-antitoxin system, antitoxin component, Xre family {ECO:0000313|EMBL:ERI82951.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
transcriptional regulator
L2_019_244G1_scaffold_191_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17192..18337
DNA (1146bp) protein (382aa)
HipA domain protein n=5 Tax=Bifidobacterium bifidum RepID=E3EP10_BIFBS
HipA domain-containing protein
HipA domain protein {ECO:0000313|EMBL:ADO53117.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_244G1_scaffold_191_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18442..18810
DNA (369bp) protein (123aa)
Putative outer membrane protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2LBG9_BIFBI
Putative outer membrane protein {ECO:0000313|EMBL:EKF15199.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L2_019_244G1_scaffold_191_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18836..19813)
DNA (978bp) protein (326aa)
Putative integral membrane permease protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I742_BIFBI
Putative integral membrane permease protein {ECO:0000313|EMBL:EKE50684.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
putative integral membrane permease protein
L2_019_244G1_scaffold_191_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19838..20362)
DNA (525bp) protein (175aa)
PadR family transcriptional regulator n=2 Tax=Bifidobacterium bifidum RepID=K2IPM7_BIFBI
PadR family transcriptional regulator {ECO:0000313|EMBL:EKE50685.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
PadR family transcriptional regulator
L2_019_244G1_scaffold_191_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20409..21125)
DNA (717bp) protein (239aa)
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MD10_BIFBI
L2_019_244G1_scaffold_191_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21128..21838)
DNA (711bp) protein (237aa)
fabG; 3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MSY0_BIFBI
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EKF15203.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_019_244G1_scaffold_191_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21991..23349)
DNA (1359bp) protein (453aa)
Na+ driven multidrug efflux pump n=2 Tax=Bifidobacterium RepID=R6GCN9_9BIFI
Na+ driven multidrug efflux pump {ECO:0000313|EMBL:KFI43005.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Na+ driven multidrug efflux pump
L2_019_244G1_scaffold_191_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23423..25930)
DNA (2508bp) protein (836aa)
Excinuclease ABC subunit A n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EP03_BIFBS
Excinuclease ABC subunit A {ECO:0000313|EMBL:ADO53110.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
uvrA1; excinuclease ABC subunit A
L2_019_244G1_scaffold_191_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26231..26563)
DNA (333bp) protein (111aa)
Serine/threonine protein kinase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHW3_BIFBI
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AFL04476.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_019_244G1_scaffold_191_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26756..26986)
DNA (231bp) protein (77aa)
Pre protein translocase subunit (ATPase, RNAhelicase) n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHW2_BIFBI
secA; pre protein translocase subunit (ATPase, RNAhelicase)
Pre protein translocase subunit (ATPase, RNAhelicase) {ECO:0000313|EMBL:AFL04475.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_019_244G1_scaffold_191_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27205..28419
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M2Z7_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF16396.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
Displaying items 1-30 of 48 in total

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