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L2_019_244G1_scaffold_256

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_256_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(443..1765)
DNA (1323bp) protein (441aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Nicotinate phosphoribosyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MRS2_BIFL1
nicotinate phosphoribosyltransferase
L2_019_244G1_scaffold_256_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1996..2622
DNA (627bp) protein (209aa)
Uncharacterized protein n=7 Tax=Bifidobacterium longum RepID=B3DTL0_BIFLD
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KEY31688.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_244G1_scaffold_256_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2722..3150)
DNA (429bp) protein (143aa)
Transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MRR9_BIFL1
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ70463.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_019_244G1_scaffold_256_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3324..4334
DNA (1011bp) protein (337aa)
Tas3 n=6 Tax=Bifidobacterium RepID=E4R097_BIFLM
reductase
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:KEY31690.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_244G1_scaffold_256_5
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4376..4669)
DNA (294bp) protein (98aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DTL3_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV37983.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_244G1_scaffold_256_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4943..5443
DNA (501bp) protein (167aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Phosphopantetheine adenylyltransferase n=18 Tax=Bifidobacterium RepID=COAD_BIFLD
phosphopantetheine adenylyltransferase
L2_019_244G1_scaffold_256_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5451..6341
DNA (891bp) protein (297aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=B3DTL5_BIFLD
hypothetical protein
Cell division protein {ECO:0000313|EMBL:AIW43339.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_244G1_scaffold_256_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6430..7059
DNA (630bp) protein (210aa)
Predicted metal-binding, possibly nucleic acid-binding protein n=9 Tax=Bifidobacterium RepID=D6DA03_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ65990.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_019_244G1_scaffold_256_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7148..7342
DNA (195bp) protein (65aa)
50S ribosomal protein L32 n=20 Tax=Bifidobacterium RepID=RL32_BIFLD
50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_019_244G1_scaffold_256_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7485..8213
DNA (729bp) protein (243aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Ribonuclease 3 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GN15_BIFLS
L2_019_244G1_scaffold_256_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8374..10341
DNA (1968bp) protein (656aa)
Acetolactate synthase {ECO:0000313|EMBL:AIW43335.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AIW43335.1};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
IlvB n=12 Tax=Bifidobacterium RepID=E4R0A4_BIFLM
ilvB; ilvb
L2_019_244G1_scaffold_256_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10358..10912
DNA (555bp) protein (185aa)
Acetolactate synthase small subunit n=17 Tax=Bifidobacterium RepID=B3DTM0_BIFLD
acetolactate synthase small subunit
Acetolactate synthase small subunit {ECO:0000313|EMBL:AAN24137.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_019_244G1_scaffold_256_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11068..11346
DNA (279bp) protein (93aa)
Plasmid stability protein n=17 Tax=Bifidobacterium RepID=B3DTM1_BIFLD
plasmid stabilization protein
Arc-like DNA binding domain protein {ECO:0000313|EMBL:EIJ21567.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_244G1_scaffold_256_14
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11356..11775
DNA (420bp) protein (140aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Ribonuclease VapC n=18 Tax=Bifidobacterium RepID=B3DTM2_BIFLD
plasmid stabilization protein
L2_019_244G1_scaffold_256_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11828..14104)
DNA (2277bp) protein (759aa)
ABC transporter ATPase component n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DTM3_BIFLD
ABC transporter ATPase component {ECO:0000313|EMBL:ACD98492.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
uup2; ABC transporter ATPase
L2_019_244G1_scaffold_256_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14152..15000)
DNA (849bp) protein (283aa)
Possible amidotransferase n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7G6_BIFLO
amidotransferase
Possible amidotransferase {ECO:0000313|EMBL:AAN24140.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_019_244G1_scaffold_256_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15099..16748
DNA (1650bp) protein (550aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Cysteine--tRNA ligase n=13 Tax=Bifidobacterium RepID=B3DTM5_BIFLD
cysteinyl-tRNA synthase
L2_019_244G1_scaffold_256_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16767..17675)
DNA (909bp) protein (303aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=Q8G7G4_BIFLO
Co/Zn/Cd cation transport protein
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EEI81764.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_019_244G1_scaffold_256_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17884..19632
DNA (1749bp) protein (583aa)
Signal recognition particle protein n=3 Tax=Bifidobacterium longum RepID=Q8G7G3_BIFLO
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
ffh; signal recognition particle protein
L2_019_244G1_scaffold_256_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19709..20551
DNA (843bp) protein (281aa)
Metal-dependent hydrolase n=11 Tax=Bacteria RepID=B3DTM8_BIFLD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ65978.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_019_244G1_scaffold_256_21
unknown

Not on your lists

comp(20464..20685)
DNA (222bp) protein (74aa)

This feature has no annotations

L2_019_244G1_scaffold_256_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


20951..21412
DNA (462bp) protein (154aa)
30S ribosomal protein S16 n=15 Tax=Bifidobacterium RepID=RS16_BIFLO
rpsP; rpsp
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_019_244G1_scaffold_256_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21433..21666
DNA (234bp) protein (78aa)
UPF0109 protein BLD_1053 n=22 Tax=Bifidobacterium RepID=B3DTN0_BIFLD
Predicted RNA-binding protein (contains KH domain)
UPF0109 protein BL0306 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_019_244G1_scaffold_256_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21689..22303
DNA (615bp) protein (205aa)
Ribosome maturation factor RimM n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XWK7_9BIFI
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
16S rRNA processing protein RimM
L2_019_244G1_scaffold_256_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22609..23952
DNA (1344bp) protein (448aa)
AAA domain protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=I3AZ93_BIFLN
AAA domain protein {ECO:0000313|EMBL:KFI72776.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
protein of unknown function DUF4143
L2_019_244G1_scaffold_256_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23957..25012)
DNA (1056bp) protein (352aa)
Inosine-uridine preferring nucleoside hydrolase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B1W9_BIFLN
inosine-uridine nucleoside N-ribohydrolase
Inosine-uridine nucleoside N-ribohydrolase {ECO:0000313|EMBL:AIW43323.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_244G1_scaffold_256_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25110..25973)
DNA (864bp) protein (288aa)
Tas4 n=13 Tax=Bifidobacterium RepID=E4R0B8_BIFLM
oxidoreductase
Aldo/keto reductase {ECO:0000313|EMBL:KEY23454.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_244G1_scaffold_256_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26039..28297)
DNA (2259bp) protein (753aa)
Predicted membrane protein (DUF2207) n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DA23_BIFLN
Predicted membrane protein (DUF2207) {ECO:0000313|EMBL:CBK71026.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Predicted membrane protein (DUF2207).
L2_019_244G1_scaffold_256_29
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28361..28939)
DNA (579bp) protein (193aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=B3DTP5_BIFLD
hypothetical protein
LemA family protein {ECO:0000313|EMBL:EFV37952.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_244G1_scaffold_256_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29236..30015)
DNA (780bp) protein (260aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Phosphate import ATP-binding protein PstB n=8 Tax=Bifidobacterium RepID=PSTB_BIFLO
phosphate ABC transporter ATPase subunit
Displaying items 1-30 of 50 in total

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