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L2_019_244G1_scaffold_293

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_293_1
unknown

Not on your lists

comp(154..246)
DNA (93bp) protein (31aa)

This feature has no annotations

L2_019_244G1_scaffold_293_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(279..1070)
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C7N8_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27931.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_019_244G1_scaffold_293_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1312..2706
DNA (1395bp) protein (465aa)
Putative permease n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E3D3_BIFBR
Guanine-hypoxanthine permease
Putative permease {ECO:0000313|EMBL:ERI86836.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_019_244G1_scaffold_293_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3337..4116)
DNA (780bp) protein (260aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Phosphate ABC transporter, ATP-binding protein n=3 Tax=Bifidobacterium breve RepID=F6C7P0_BIFBA
Phosphate transport ATP-binding protein pstB
L2_019_244G1_scaffold_293_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4162..5160)
DNA (999bp) protein (333aa)
Phosphate transport system permease protein pstA n=4 Tax=Bifidobacterium breve RepID=F9XYG3_BIFBU
Phosphate transport system permease protein pstA
Phosphate transport system permease protein pstA {ECO:0000313|EMBL:AHJ21872.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_019_244G1_scaffold_293_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5160..6113)
DNA (954bp) protein (318aa)
Phosphate ABC transporter, permease protein PstC n=6 Tax=Bifidobacterium breve RepID=F6C7P2_BIFBA
Phosphate transport system permease protein pstC
Phosphate transport system permease protein pstC {ECO:0000313|EMBL:ABE96347.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_019_244G1_scaffold_293_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6320..7450)
DNA (1131bp) protein (377aa)
Phosphate-binding protein PstS n=4 Tax=Bifidobacterium breve RepID=F9XYN9_BIFBU
Phosphate-binding protein
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_019_244G1_scaffold_293_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7704..8474)
DNA (771bp) protein (257aa)
Two-component response regulator PhoP n=4 Tax=Bifidobacterium breve RepID=F9XYP0_BIFBU
Two-component response regulator PhoP
Two-component response regulator PhoP {ECO:0000313|EMBL:AHJ20025.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_019_244G1_scaffold_293_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8527..9864)
DNA (1338bp) protein (446aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CQM5_BIFBR
Phosphate regulon sensor protein PhoR
L2_019_244G1_scaffold_293_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10044..11351)
DNA (1308bp) protein (436aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C8L0_BIFBR
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERI86829.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
transporter, major facilitator family protein
L2_019_244G1_scaffold_293_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11619..12332)
DNA (714bp) protein (238aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
MTA/SAH nucleosidase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CRY1_BIFBR
5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase
L2_019_244G1_scaffold_293_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12472..13704)
DNA (1233bp) protein (411aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:AEF27896.1}; EC=2.5.1.54 {ECO:0000313|EMBL:AEF27896.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KYY4_BIFBR
3-deoxy-7-phosphoheptulonate synthase
L2_019_244G1_scaffold_293_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13769..14905)
DNA (1137bp) protein (379aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=3 Tax=Bifidobacterium breve RepID=D4BQJ6_BIFBR
3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive
L2_019_244G1_scaffold_293_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15125..16471)
DNA (1347bp) protein (449aa)
Peptidase C1-like family n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQJ5_BIFBR
Aminopeptidase C
Peptidase C1-like family protein {ECO:0000313|EMBL:ERI86825.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_019_244G1_scaffold_293_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16589..18028)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C8K6_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI86824.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Hypothetical protein
L2_019_244G1_scaffold_293_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18167..18844)
DNA (678bp) protein (226aa)
pcp; Pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
Putative pyroglutamyl-peptidase I n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CRX7_BIFBR
Putative pyroglutamyl-peptidase I {ECO:0000313|EMBL:ERI86823.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_019_244G1_scaffold_293_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18883..19728)
DNA (846bp) protein (282aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=3 Tax=Bifidobacterium breve RepID=F6C7Z1_BIFBA
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L2_019_244G1_scaffold_293_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19799..20863)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E3C2_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI86821.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_019_244G1_scaffold_293_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20874..22412)
DNA (1539bp) protein (513aa)
Peptidase, U32 family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C8K1_BIFBR
Peptidase, U32 family {ECO:0000313|EMBL:ERI86819.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Peptidase family U32
L2_019_244G1_scaffold_293_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22486..23436
DNA (951bp) protein (317aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014918}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014917};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CQL7_BIFBR
tRNA (Guanine-N1) -methyltransferase
L2_019_244G1_scaffold_293_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23438..24019)
DNA (582bp) protein (194aa)
Putative methylase {ECO:0000313|EMBL:BAR00745.1}; RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EFE88483.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFE88483.1};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
RNA methyltransferase, RsmD family n=3 Tax=Bifidobacterium breve RepID=D4BQI8_BIFBR
Methyltransferase
L2_019_244G1_scaffold_293_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24355..26961)
DNA (2607bp) protein (869aa)
Putative ATP-dependent DNA helicase RecG n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DYP2_BIFBR
Putative ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:ERI86817.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ATP-dependent DNA helicase recG
L2_019_244G1_scaffold_293_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(27068..27283)
DNA (216bp) protein (72aa)
50S ribosomal protein L28 n=6 Tax=Bifidobacterium breve RepID=F6C7Z7_BIFBA
LSU ribosomal protein L28P
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_019_244G1_scaffold_293_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27541..28557
DNA (1017bp) protein (339aa)
Kinase, PfkB family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CQL2_BIFBR
Ribokinase
Kinase, PfkB family {ECO:0000313|EMBL:ERI86815.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_019_244G1_scaffold_293_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28711..29967
DNA (1257bp) protein (419aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C8J7_BIFBR
Transporter, MFS superfamily
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERI86814.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Displaying 25 items

View Taxonomy