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L2_019_244G1_scaffold_297

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_297_1
unknown

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227..331
DNA (105bp) protein (35aa)

This feature has no annotations

L2_019_244G1_scaffold_297_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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399..2126
DNA (1728bp) protein (576aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B5Q0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45659.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_019_244G1_scaffold_297_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2189..2341
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Ruminococcus gnavus RepID=A7B5P9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17454.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_019_244G1_scaffold_297_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2311..3156
DNA (846bp) protein (282aa)
Amidohydrolase family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLB5_9FIRM
Amidohydrolase family protein {ECO:0000313|EMBL:CCZ66480.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_019_244G1_scaffold_297_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3208..3837)
DNA (630bp) protein (210aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=2 Tax=Clostridiales RepID=A7B5P6_RUMGN
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_019_244G1_scaffold_297_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3850..5283)
DNA (1434bp) protein (478aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=3 Tax=Clostridiales RepID=A7B5P5_RUMGN
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_019_244G1_scaffold_297_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5299..7065)
DNA (1767bp) protein (589aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Archaeal/vacuolar-type H+-ATPase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=3 Tax=Clostridiales RepID=F7JZI9_9FIRM
L2_019_244G1_scaffold_297_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7058..7645)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TT95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66484.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Archaeal/vacuolar-type H+-ATPase subunit E
L2_019_244G1_scaffold_297_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7675..7977)
DNA (303bp) protein (101aa)
Archaeal/vacuolar-type H+-ATPase subunit F (EC:3.6.3.14)
ATP synthase subunit F n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLC0_9FIRM
ATP synthase subunit F {ECO:0000313|EMBL:CCZ66485.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_019_244G1_scaffold_297_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7985..8419)
DNA (435bp) protein (145aa)
ATP synthase subunit C. (EC:3.6.3.14)
ATP synthase subunit C n=3 Tax=Clostridiales RepID=A7B5P1_RUMGN
ATP synthase subunit C {ECO:0000313|EMBL:CCZ66486.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_019_244G1_scaffold_297_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8435..10384)
DNA (1950bp) protein (650aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
V-type ATPase 116kDa subunit family protein n=3 Tax=Lachnospiraceae RepID=A7B5P0_RUMGN
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_019_244G1_scaffold_297_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10384..11427)
DNA (1044bp) protein (348aa)
Archaeal/vacuolar-type H+-ATPase subunit C (EC:3.6.3.14)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BQM4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17463.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_019_244G1_scaffold_297_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11431..11742)
DNA (312bp) protein (104aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B5N8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45646.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_019_244G1_scaffold_297_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12062..12982
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BRP7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17465.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_019_244G1_scaffold_297_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12990..14507
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66490.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_019_244G1_scaffold_297_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14713..15291
DNA (579bp) protein (193aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U5T3_9FIRM
L2_019_244G1_scaffold_297_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15524..15835
DNA (312bp) protein (104aa)
Thioredoxin n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLA7_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
thioredoxin
L2_019_244G1_scaffold_297_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15938..16195
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TTA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66494.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
addiction module antitoxin
L2_019_244G1_scaffold_297_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16195..16458
DNA (264bp) protein (88aa)
Addiction module toxin Txe/YoeB family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLD1_9FIRM
Addiction module toxin Txe/YoeB family {ECO:0000313|EMBL:CCZ66495.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
addiction module toxin, Txe/YoeB family
L2_019_244G1_scaffold_297_20
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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17174..18523
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JXC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38626.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
extracellular solute-binding protein
L2_019_244G1_scaffold_297_21
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18614..19495
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K576_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38627.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family
L2_019_244G1_scaffold_297_22
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19498..20325
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JX05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38628.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
L2_019_244G1_scaffold_297_23
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20309..21607
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JWN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38629.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
glycogen debranching enzyme
L2_019_244G1_scaffold_297_24
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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21873..23153
DNA (1281bp) protein (427aa)
Extracellular solute-binding protein family 1 n=1 Tax=Paenibacillus lactis 154 RepID=G4H8S4_9BACL
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EHB68259.1}; Flags: Precursor;; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
ABC transporter substrate-binding protein
L2_019_244G1_scaffold_297_25
Planococcus antarcticus, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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23218..24096
DNA (879bp) protein (293aa)
Lactose transporter permease n=1 Tax=Planococcus antarcticus DSM 14505 RepID=I4X8D3_9BACL
Lactose transporter permease {ECO:0000313|EMBL:EIM07975.1}; TaxID=1185653 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus.;" source="Planococcus antarcticus DSM 14505.;"
lactose ABC transporter permease
L2_019_244G1_scaffold_297_26
Paenibacillus sp. FSL H7-0737, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24093..24899
DNA (807bp) protein (269aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paenibacillus lactis 154 RepID=G4H8S6_9BACL
lactose ABC transporter permease
Lactose ABC transporter permease {ECO:0000313|EMBL:AIQ24918.1}; TaxID=1536775 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0737.;"
L2_019_244G1_scaffold_297_27
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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24981..26009
DNA (1029bp) protein (343aa)
Transcriptional regulator, LacI family n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZY44_MAHA5
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEE97740.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L2_019_244G1_scaffold_297_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26014..28029
DNA (2016bp) protein (672aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCB0_9FIRM
L2_019_244G1_scaffold_297_29
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28046..29203
DNA (1158bp) protein (386aa)
Beta-lactamase n=1 Tax=Clostridium sp. D5 RepID=F0YY11_9CLOT
Beta-lactamase {ECO:0000313|EMBL:EGB93113.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
beta-lactamase
L2_019_244G1_scaffold_297_30
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29422..30960
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JWR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38620.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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