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L2_019_244G1_scaffold_307

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_307_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

123..629
DNA (507bp) protein (169aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=4 Tax=Bifidobacterium breve RepID=F6C8N9_BIFBA
Hypothetical protein with YbaK / prolyl-tRNA synthetases associated domain
L2_019_244G1_scaffold_307_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(670..1662)
DNA (993bp) protein (331aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=4 Tax=Bifidobacterium breve RepID=F6C8N8_BIFBA
L2_019_244G1_scaffold_307_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1954..2910
DNA (957bp) protein (319aa)
Aldose 1-epimerase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BS18_BIFBR
Aldose 1-epimerase
Aldose 1-epimerase {ECO:0000313|EMBL:AHJ21406.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_019_244G1_scaffold_307_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3045..3989
DNA (945bp) protein (315aa)
Aldose 1-epimerase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C8N6_BIFBA
aldose 1-epimerase
Aldose 1-epimerase {ECO:0000313|EMBL:AEF27041.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_019_244G1_scaffold_307_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4251..4559)
DNA (309bp) protein (103aa)
Uncharacterized protein n=6 Tax=Bifidobacterium breve RepID=F6C8N5_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ19606.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_019_244G1_scaffold_307_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4556..5317)
DNA (762bp) protein (254aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y1M8_BIFBU
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:AHJ19607.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_019_244G1_scaffold_307_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5469..7016
DNA (1548bp) protein (516aa)
mur; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--lysine ligase (EC:6.3.2.7)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|SAAS:SAAS00276926};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--lysine ligase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y1M9_BIFBU
L2_019_244G1_scaffold_307_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7077..8084
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C8N2_BIFBA
Cell wall biosynthesis-associated protein
Cell wall biosynthesis-associated protein {ECO:0000313|EMBL:AHJ21411.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_019_244G1_scaffold_307_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8237..8713
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI0002E6B229
Uncharacterized protein {ECO:0000313|EMBL:EFE88224.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Cell wall biosynthesis-associated protein
L2_019_244G1_scaffold_307_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8727..12374)
DNA (3648bp) protein (1216aa)
Chromosome partition protein Smc n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0M0_BIFBR
Chromosome partition protein smc
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_019_244G1_scaffold_307_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12419..14020)
DNA (1602bp) protein (534aa)
FolC protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AGB9_BIFBR
Folylpolyglutamate synthase/Dihydrofolate synthase
FolC protein {ECO:0000313|EMBL:EPD75359.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_019_244G1_scaffold_307_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14590..16185
DNA (1596bp) protein (532aa)
Peptidase, M24 family {ECO:0000313|EMBL:EFE88220.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFE88220.1};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Peptidase, M24 family n=3 Tax=Bifidobacterium breve RepID=F6C8M9_BIFBA
Xaa-Pro aminopeptidase
L2_019_244G1_scaffold_307_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16323..16844
DNA (522bp) protein (174aa)
Hydrolase, NUDIX family n=5 Tax=Bifidobacterium breve RepID=F6C8M8_BIFBA
Phosphohydrolase (MutT/nudix family protein)
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFE88219.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR00284.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_019_244G1_scaffold_307_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16942..18219)
DNA (1278bp) protein (426aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
N-acetylglucosamine-6-phosphate deacetylase n=3 Tax=Bifidobacterium breve RepID=F6C8M7_BIFBA
putative N-acetylglucosamine-6-phosphate deacetylase
L2_019_244G1_scaffold_307_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18272..19084)
DNA (813bp) protein (271aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Glucosamine-6-phosphate deaminase n=3 Tax=Bifidobacterium breve RepID=F6C8M6_BIFBA
Glucosamine-6-phosphate isomerase
L2_019_244G1_scaffold_307_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19421..20545
DNA (1125bp) protein (375aa)
Transcriptional regulator, ROK family n=3 Tax=Bifidobacterium breve RepID=F9Y1N8_BIFBU
Transcriptional regulator, ROK family
Transcriptional regulator, ROK family {ECO:0000313|EMBL:AHJ21420.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_019_244G1_scaffold_307_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20573..21487)
DNA (915bp) protein (305aa)
ROK family protein n=7 Tax=Bifidobacterium breve RepID=F6C8M4_BIFBA
Sugar kinase, ROK family
Sugar kinase, ROK family {ECO:0000313|EMBL:AHJ21421.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_019_244G1_scaffold_307_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21713..22927
DNA (1215bp) protein (405aa)
N-acetylglucosamine repressor n=2 Tax=Bifidobacterium breve RepID=F9Y1P0_BIFBU
N-acetylglucosamine repressor
Uncharacterized protein {ECO:0000313|EMBL:EPD75352.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_019_244G1_scaffold_307_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22997..23893
DNA (897bp) protein (299aa)
Kinase, PfkB family n=4 Tax=Bifidobacterium breve RepID=F6C8M2_BIFBA
pfkB family carbohydrate kinase
Kinase, PfkB family {ECO:0000313|EMBL:EFE88213.1}; Putative sugar kinase {ECO:0000313|EMBL:BAR00290.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_019_244G1_scaffold_307_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24146..24565
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BRZ9_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75350.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
glucose/galactose transporter
L2_019_244G1_scaffold_307_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24538..25122
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AGB4_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75349.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
transporter, member of MFS, possible L-fucose permease
L2_019_244G1_scaffold_307_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25246..25734)
DNA (489bp) protein (163aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Bifidobacterium breve RepID=F6C8M0_BIFBA
D-tyrosyl-tRNA(Tyr) deacylase
Displaying 22 items

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