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L2_019_244G1_scaffold_313

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_313_1
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63..1178)
DNA (1116bp) protein (372aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y7C6_BILWA
L2_019_244G1_scaffold_313_2
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1496..5659)
DNA (4164bp) protein (1388aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y7C3_BILWA
rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit
L2_019_244G1_scaffold_313_3
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5930..10093)
DNA (4164bp) protein (1388aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1T1_9DELT
L2_019_244G1_scaffold_313_4
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10404..10541)
DNA (138bp) protein (46aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1T0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW45868.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
L2_019_244G1_scaffold_313_5
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10718..11029
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1S9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW45867.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
L2_019_244G1_scaffold_313_6
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11243..11536
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1S8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW45866.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
L2_019_244G1_scaffold_313_7
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11920..12300)
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 n=2 Tax=Bilophila RepID=E5Y7B8_BILWA
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
rplL; 50S ribosomal protein L7/L12
L2_019_244G1_scaffold_313_8
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12346..12864)
DNA (519bp) protein (173aa)
50S ribosomal protein L10 n=2 Tax=Bilophila RepID=E5Y7B7_BILWA
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
rplJ; 50S ribosomal protein L10
L2_019_244G1_scaffold_313_9
unknown

Not on your lists

comp(12876..13004)
DNA (129bp) protein (43aa)

This feature has no annotations

L2_019_244G1_scaffold_313_10
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13048..13752)
DNA (705bp) protein (235aa)
50S ribosomal protein L1 n=2 Tax=Bilophila RepID=E5Y7B6_BILWA
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
rplA; 50S ribosomal protein L1
L2_019_244G1_scaffold_313_11
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13843..14265)
DNA (423bp) protein (141aa)
50S ribosomal protein L11 n=2 Tax=Bilophila RepID=E5Y7B5_BILWA
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
rplK; 50S ribosomal protein L11
L2_019_244G1_scaffold_313_12
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14320..15009)
DNA (690bp) protein (230aa)
Transcription termination/antitermination protein NusG n=2 Tax=Bilophila RepID=E5Y7B4_BILWA
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
nusG; transcription termination/antitermination factor NusG
L2_019_244G1_scaffold_313_13
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15021..15263)
DNA (243bp) protein (81aa)
Protein translocase subunit SecE n=2 Tax=Bilophila RepID=E5Y7B3_BILWA
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
secE; preprotein translocase, SecE subunit
L2_019_244G1_scaffold_313_14
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15380..15529)
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=2 Tax=Bilophila RepID=E5Y7B2_BILWA
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
rpmG; 50S ribosomal protein L33
L2_019_244G1_scaffold_313_15
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15534..16727)
DNA (1194bp) protein (398aa)
tufA; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=2 Tax=Bilophila RepID=E5Y7B1_BILWA
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
L2_019_244G1_scaffold_313_16
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17485..20133)
DNA (2649bp) protein (883aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1R9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW45857.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
pqqL; Zn-dependent peptidase
L2_019_244G1_scaffold_313_17
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20439..21722
DNA (1284bp) protein (428aa)
ThiC family protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1R8_9DELT
ThiC family protein {ECO:0000313|EMBL:EGW45856.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
thiamine biosynthesis protein ThiC
L2_019_244G1_scaffold_313_18
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22070..23086)
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1K2_9DELT
L2_019_244G1_scaffold_313_19
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23097..23654)
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Bilophila RepID=E5Y747_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EGW45948.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
putative GAF sensor protein
L2_019_244G1_scaffold_313_20
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23837..24637)
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
Pyrroline-5-carboxylate reductase n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1K0_9DELT
proC; pyrroline-5-carboxylate reductase
L2_019_244G1_scaffold_313_21
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24791..25546)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y745_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV44185.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
hypothetical protein
Displaying 21 items

View Taxonomy