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L2_019_244G1_scaffold_374

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_374_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..395)
DNA (393bp) protein (131aa)
Divergent AAA domain protein n=2 Tax=Bifidobacterium breve RepID=D4BP48_BIFBR
Divergent AAA domain protein {ECO:0000313|EMBL:EEI81435.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
putative transcriptional regulator
L2_019_244G1_scaffold_374_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(569..1189)
DNA (621bp) protein (207aa)
Amidases related to nicotinamidase (EC:3.5.1.-)
Isochorismatase family protein {ECO:0000313|EMBL:EIJ28432.1}; EC=3.-.-.- {ECO:0000313|EMBL:EIJ28432.1};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Amidases related to nicotinamidase n=15 Tax=Bifidobacterium RepID=D6D8Y0_BIFLN
L2_019_244G1_scaffold_374_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1342..1743
DNA (402bp) protein (134aa)
Predicted lactoylglutathione lyase n=15 Tax=Bifidobacterium RepID=D6D8X9_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24709.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_019_244G1_scaffold_374_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1832..2770)
DNA (939bp) protein (313aa)
Co/Zn/Cd efflux system component n=10 Tax=Bifidobacterium longum RepID=B3DSG0_BIFLD
czcD2; czcd2
Cobalt transporter {ECO:0000313|EMBL:AIW43670.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_244G1_scaffold_374_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2980..3867
DNA (888bp) protein (296aa)
Uncharacterized protein n=7 Tax=Bifidobacterium longum RepID=Q8G5V8_BIFLO
hypothetical protein
Putative hydrolse {ECO:0000313|EMBL:ACD98078.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_244G1_scaffold_374_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3864..4124
DNA (261bp) protein (87aa)
Uncharacterized protein n=8 Tax=Bifidobacterium longum RepID=B3DSF8_BIFLD
Protein of unknown function (DUF3036).
Uncharacterized protein {ECO:0000313|EMBL:KEY22096.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_244G1_scaffold_374_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4131..4340
DNA (210bp) protein (70aa)
Transcriptional regulator n=20 Tax=Bifidobacterium RepID=D6D8X5_BIFLN
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABE95565.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_019_244G1_scaffold_374_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4470..5834)
DNA (1365bp) protein (455aa)
Xanthine permease n=12 Tax=Bifidobacterium RepID=D6D8X4_BIFLN
xanthine/uracil transport protein
Xanthine/uracil transport protein {ECO:0000313|EMBL:BAJ70905.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_019_244G1_scaffold_374_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5885..6466)
DNA (582bp) protein (194aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Xanthine phosphoribosyltransferase n=17 Tax=Bifidobacterium RepID=XPT_BIFLD
apt2; apt2
L2_019_244G1_scaffold_374_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6553..9285
DNA (2733bp) protein (911aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Putative ATP-dependent DNA helicase PcrA n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GTL7_BIFLN
ATP-dependent DNA helicase PcrA
L2_019_244G1_scaffold_374_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9430..9828
DNA (399bp) protein (133aa)
Uncharacterized protein n=17 Tax=Bifidobacterium RepID=B3DSF3_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY32823.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_244G1_scaffold_374_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9919..11136
DNA (1218bp) protein (406aa)
ABC transporter permease n=8 Tax=Bifidobacterium longum RepID=F8AQU4_BIFLN
ABC transporter permease
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEI81422.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_019_244G1_scaffold_374_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11138..12106
DNA (969bp) protein (323aa)
ABC transporter ATP-binding protein n=8 Tax=Bifidobacterium longum RepID=F8AQU3_BIFLN
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EIJ28429.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_019_244G1_scaffold_374_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12305..12931
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=20 Tax=Bifidobacterium RepID=RS4_BIFLD
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_019_244G1_scaffold_374_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13021..15024)
DNA (2004bp) protein (668aa)
Acyltransferase n=13 Tax=Bifidobacterium longum RepID=C2GTL2_BIFLN
Acyltransferase {ECO:0000313|EMBL:KFI69971.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_019_244G1_scaffold_374_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15111..15839
DNA (729bp) protein (243aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=Q8G5W7_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24697.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_019_244G1_scaffold_374_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16042..16440
DNA (399bp) protein (133aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=B3DSE5_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY22107.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_244G1_scaffold_374_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16440..16676
DNA (237bp) protein (79aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DSE4_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98063.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_244G1_scaffold_374_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


16805..19486
DNA (2682bp) protein (894aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Alanine--tRNA ligase n=11 Tax=Bifidobacterium RepID=SYA_BIFLO
alanyl-tRNA synthase
L2_019_244G1_scaffold_374_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19495..19953
DNA (459bp) protein (153aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
Putative Holliday junction resolvase n=8 Tax=Bifidobacterium RepID=RUVX_BIFLD
endonuclease for recombination
L2_019_244G1_scaffold_374_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19964..21145
DNA (1182bp) protein (394aa)
Aminodeoxychorismate lyase n=11 Tax=Bifidobacterium longum RepID=B3DSE1_BIFLD
aminodeoxychorismate lyase
YceG family protein {ECO:0000313|EMBL:EIJ24486.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_244G1_scaffold_374_22
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21313..21786)
DNA (474bp) protein (158aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=C2GTK5_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95926.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_019_244G1_scaffold_374_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21850..23037
DNA (1188bp) protein (396aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Chorismate synthase n=14 Tax=Bifidobacterium RepID=AROC_BIFLD
chorismate synthase
L2_019_244G1_scaffold_374_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23120..24742
DNA (1623bp) protein (541aa)
Bifunctional shikimate kinase/3-dehydroquinate synthase n=12 Tax=Bifidobacterium RepID=AROKB_BIFLO
shikimate kinase
3-dehydroquinate synthase {ECO:0000313|EMBL:KEY22114.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_244G1_scaffold_374_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24906..25352
DNA (447bp) protein (149aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
3-dehydroquinate dehydratase n=15 Tax=Bifidobacterium RepID=B3DSD7_BIFLD
3-dehydroquinate dehydratase
L2_019_244G1_scaffold_374_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25504..26994
DNA (1491bp) protein (497aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
CTP synthetase n=1 Tax=Bifidobacterium longum RepID=UPI0000393263
pyrG; pyrg
Displaying 26 items

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