ggKbase home page

L2_019_244G1_scaffold_393

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_393_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..417)
DNA (417bp) protein (139aa)
Receptor family ligand binding protein n=1 Tax=Escherichia coli EC96038 RepID=K3GUQ7_ECOLX
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) {ECO:0000313|EMBL:CDL45242.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
livJ; leucine ABC transporter subunit substrate-binding protein LivJ
L2_019_244G1_scaffold_393_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(422..844)
DNA (423bp) protein (141aa)
Leu/Ile/Val-binding protein n=2 Tax=Escherichia coli RepID=T6S6D7_ECOLX
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) {ECO:0000313|EMBL:CDL45243.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
livJ; high-affinity amino acid transport system periplasmic binding protein,Leu/Ile/Val-binding protein precursor,leucine ABC transporter subunit substrate-binding protein LivK,urea ABC transporter, urea binding protein,Receptor family ligand binding region
L2_019_244G1_scaffold_393_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1115..1969)
DNA (855bp) protein (285aa)
RNA polymerase sigma factor RpoH n=1377 Tax=Enterobacteriaceae RepID=RPOH_ECO57
rpoH; alternative sigma factor RpoH
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L2_019_244G1_scaffold_393_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2214..3197)
DNA (984bp) protein (328aa)
Cell division protein FtsX n=28 Tax=Escherichia coli RepID=C8TJQ1_ECO26
ftsX; cell division protein FtsX
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1165949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11 str. CVM9942.;"
L2_019_244G1_scaffold_393_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3190..3858)
DNA (669bp) protein (223aa)
Cell division ATP-binding protein FtsE n=1333 Tax=Enterobacteriaceae RepID=FTSE_ECO57
cell division protein FtsE
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EKJ12656.1}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
L2_019_244G1_scaffold_393_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3861..4850)
DNA (990bp) protein (330aa)
Signal recognition particle receptor FtsY n=7 Tax=Escherichia coli RepID=F4TZK0_ECOLX
cell division protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_244G1_scaffold_393_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5439..6035
DNA (597bp) protein (199aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
Ribosomal RNA small subunit methyltransferase D n=840 Tax=Enterobacteriaceae RepID=RSMD_ECOL6
rsmD; 16S rRNA m(2)G966-methyltransferase
L2_019_244G1_scaffold_393_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6025..6294
DNA (270bp) protein (90aa)
Uncharacterized protein n=1266 Tax=Enterobacteriaceae RepID=B7L5R9_ECO55
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZD91400.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L2_019_244G1_scaffold_393_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6297..6656)
DNA (360bp) protein (120aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=T6GV66_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQP45207.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
yhhM; hypothetical protein
L2_019_244G1_scaffold_393_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6797..7423
DNA (627bp) protein (209aa)
Uncharacterized membrane protein YhhN n=1200 Tax=Enterobacteriaceae RepID=YHHN_ECO57
yhhN; hypothetical protein
Membrane protein {ECO:0000313|EMBL:EZA37472.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
L2_019_244G1_scaffold_393_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7497..9695
DNA (2199bp) protein (733aa)
Lead, cadmium, zinc and mercury-transporting ATPase n=6 Tax=Escherichia coli RepID=T6GTY1_ECOLX
Lead, cadmium, zinc and mercury-transporting ATPase {ECO:0000313|EMBL:EQP45209.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
zntA; zinc/cadmium/mercury/lead-transporting ATPase
L2_019_244G1_scaffold_393_12
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9956..10201)
DNA (246bp) protein (82aa)
Sulfurtransferase TusA {ECO:0000256|HAMAP-Rule:MF_00413}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00413};; tRNA 2-thiouridine synthesizing protein A {ECO:0000256|HAMAP-Rule:MF_00413}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
Sulfurtransferase TusA n=1304 Tax=Enterobacteriaceae RepID=TUSA_ECO24
sirA; sulfur transfer protein SirA
L2_019_244G1_scaffold_393_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10422..11087
DNA (666bp) protein (222aa)
Inner membrane protein yhhQ n=387 Tax=Escherichia RepID=E2QFX5_ECOLX
yhhQ; hypothetical protein
Inner membrane protein yhhQ {ECO:0000313|EMBL:EZJ35858.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L2_019_244G1_scaffold_393_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11160..11717
DNA (558bp) protein (186aa)
Protein dcrB n=286 Tax=Bacteria RepID=E2QFX6_ECOLX
hypothetical protein
Protein dcrB {ECO:0000313|EMBL:EQP45212.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_244G1_scaffold_393_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11721..12980)
DNA (1260bp) protein (420aa)
UPF0226 membrane protein G920_03402 n=2 Tax=Escherichia coli RepID=T8TV01_ECOLX
yhhS; hypothetical protein
UPF0226 membrane protein UTI89_C3989 {ECO:0000256|HAMAP-Rule:MF_01118}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L2_019_244G1_scaffold_393_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13070..14119
DNA (1050bp) protein (350aa)
Inner membrane protein n=4 Tax=Escherichia coli RepID=T6GTY6_ECOLX
Inner membrane protein {ECO:0000313|EMBL:EQP45214.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
tqsA; pheromone autoinducer 2 transporter
L2_019_244G1_scaffold_393_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14174..14761
DNA (588bp) protein (196aa)
4'-phosphopantetheinyl transferase family protein n=29 Tax=Escherichia coli RepID=I2ZHG8_ECOLX
4'-phosphopantetheinyl transferase AcpT {ECO:0000313|EMBL:EQP45215.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
holo-(acyl carrier protein) synthase 2
L2_019_244G1_scaffold_393_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14671..14847)
DNA (177bp) protein (59aa)
Uncharacterized protein n=53 Tax=Enterobacteriaceae RepID=J7QWV4_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQN23485.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L2_019_244G1_scaffold_393_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14872..16446
DNA (1575bp) protein (525aa)
Nickel-binding periplasmic protein n=336 Tax=Escherichia RepID=E2QFY0_ECOLX
Nickel ABC transporter, periplasmic nickel-binding protein {ECO:0000313|EMBL:EHU04997.1}; TaxID=868133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1A.;"
nikA; nickel ABC transporter subunit periplasmic-binding protein
L2_019_244G1_scaffold_393_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16446..17390
DNA (945bp) protein (315aa)
Nickel ABC transporter, permease subunit NikB {ECO:0000313|EMBL:EZJ48790.1}; EC=3.6.3.24 {ECO:0000313|EMBL:EZJ48790.1};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
Nickel transport system permease protein nikB n=241 Tax=Escherichia RepID=E2QFY1_ECOLX
nikB; nickel transporter permease NikB
L2_019_244G1_scaffold_393_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17387..18220
DNA (834bp) protein (278aa)
nikC; nickel ABC transporter, permease protein NikC (EC:3.6.3.24)
Nickel ABC transporter, permease subunit NikC {ECO:0000313|EMBL:EHU18742.1}; EC=3.6.3.24 {ECO:0000313|EMBL:EHU18742.1};; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
Nickel transport system permease protein nikC n=160 Tax=Escherichia RepID=E2QFY2_ECOLX
L2_019_244G1_scaffold_393_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18220..18984
DNA (765bp) protein (255aa)
Nickel import ATP-binding protein NikD {ECO:0000256|HAMAP-Rule:MF_01711}; EC=3.6.3.24 {ECO:0000256|HAMAP-Rule:MF_01711};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Nickel import ATP-binding protein NikD n=6 Tax=Escherichia coli RepID=T6GTZ1_ECOLX
nikD; nickel transporter ATP-binding protein NikD
L2_019_244G1_scaffold_393_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18981..19787
DNA (807bp) protein (269aa)
Nickel import ATP-binding protein NikE {ECO:0000256|HAMAP-Rule:MF_01712}; EC=3.6.3.24 {ECO:0000256|HAMAP-Rule:MF_01712};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
nikE; nickel transporter ATP-binding protein NikE (EC:3.6.3.24)
Nickel import ATP-binding protein NikE n=5 Tax=Escherichia coli RepID=T6H8N7_ECOLX
L2_019_244G1_scaffold_393_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19793..20194
DNA (402bp) protein (134aa)
Nickel-responsive regulator n=1363 Tax=cellular organisms RepID=NIKR_ECO24
nikR; nickel responsive regulator
Nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=910348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P12b.;"
L2_019_244G1_scaffold_393_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20203..21327)
DNA (1125bp) protein (375aa)
Inner membrane transport permease yhhJ n=6 Tax=Escherichia coli RepID=T6GV81_ECOLX
Inner membrane transport permease yhhJ {ECO:0000313|EMBL:EQP45222.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
putative transport protein
L2_019_244G1_scaffold_393_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21327..23975)
DNA (2649bp) protein (883aa)
Fused ribosome-associated ATPase: ATP-binding protein/ATP-binding protein/predicted membrane protein n=1 Tax=Escherichia coli O7:K1 str. CE10 RepID=G4PUZ2_ECOLX
Fused ribosome-associated ATPase: ATP-binding protein/ATP-binding protein/predicted membrane protein {ECO:0000313|EMBL:AEQ14724.1}; TaxID=1072459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O7:K1 str. CE10.;"
rbbA; multidrug ABC transporter permease/ATP-binding protein
L2_019_244G1_scaffold_393_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23972..25039)
DNA (1068bp) protein (356aa)
Auxiliary transport protein, membrane fusion protein (MFP) family n=60 Tax=Escherichia coli RepID=B3HMW1_ECOLX
hypothetical protein
HlyD family secretion protein {ECO:0000313|EMBL:EOW93429.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L2_019_244G1_scaffold_393_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25760..26824
DNA (1065bp) protein (355aa)
Uncharacterized protein n=81 Tax=Escherichia RepID=E1RST4_ECOUM
yhiM; hypothetical protein
Inner membrane protein yhiM {ECO:0000313|EMBL:EQP45225.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_244G1_scaffold_393_29
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26911..28104)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=83 Tax=Escherichia RepID=B3HMV9_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC76169.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L2_019_244G1_scaffold_393_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28336..29835
DNA (1500bp) protein (500aa)
Low-affinity inorganic phosphate transporter 1 n=1270 Tax=Enterobacteriaceae RepID=PITA_ECO57
phosphate transporter
Putative low-affinity inorganic phosphate transporter 2 {ECO:0000313|EMBL:EGW86901.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
Displaying items 1-30 of 62 in total

View Taxonomy