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L2_019_244G1_scaffold_418

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_418_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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227..886
DNA (660bp) protein (220aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
Topoisomerase DNA-binding C4 zinc finger domain protein n=3 Tax=Lachnospiraceae RepID=A7B5W2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17594.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_019_244G1_scaffold_418_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(941..2056)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B5W1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76698.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_019_244G1_scaffold_418_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2046..2600)
DNA (555bp) protein (185aa)
TIGR02954 family RNA polymerase sigma-70 factor n=2 Tax=Lachnospiraceae RepID=V8BSZ4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44578.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_019_244G1_scaffold_418_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2745..3026)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67730.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_019_244G1_scaffold_418_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3133..3375)
DNA (243bp) protein (81aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B5V7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17598.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_019_244G1_scaffold_418_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3835..4479
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67728.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_019_244G1_scaffold_418_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4562..5143
DNA (582bp) protein (194aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=4 Tax=Clostridiales RepID=A7B5V4_RUMGN
L2_019_244G1_scaffold_418_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5106..5849
DNA (744bp) protein (248aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED (EC:5.4.2.6)
HAD hydrolase, family IA, variant 3 n=4 Tax=Clostridiales RepID=A7B5V3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17601.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_019_244G1_scaffold_418_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5940..6449
DNA (510bp) protein (170aa)
SNARE-like domain protein n=4 Tax=Clostridiales RepID=A7B5V2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17602.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
DedA family protein
L2_019_244G1_scaffold_418_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6466..7749
DNA (1284bp) protein (428aa)
Glycosyltransferase group 1 family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWN2_9FIRM
Glycosyltransferase group 1 family protein {ECO:0000313|EMBL:CCZ67724.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
group 1 glycosyl transferase
L2_019_244G1_scaffold_418_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7697..8311
DNA (615bp) protein (205aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B5V0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44569.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_019_244G1_scaffold_418_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8348..9046
DNA (699bp) protein (233aa)
Response regulator receiver domain protein n=4 Tax=Clostridiales RepID=A7B5U9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ67722.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_019_244G1_scaffold_418_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9018..11204
DNA (2187bp) protein (729aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BT02_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44567.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
sensor histidine kinase
L2_019_244G1_scaffold_418_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11179..12129
DNA (951bp) protein (317aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BS48_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17607.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC transporter permease
L2_019_244G1_scaffold_418_15
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12432..13076
DNA (645bp) protein (215aa)
FCD domain protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2CI65_9FIRM
FCD domain protein {ECO:0000313|EMBL:ERI90184.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
transcriptional regulator, GntR family
L2_019_244G1_scaffold_418_16
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13229..14608
DNA (1380bp) protein (460aa)
Amino acid transporters n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GVF0_9FIRM
Amino acid transporters {ECO:0000313|EMBL:CDE29897.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Amino acid transporters
L2_019_244G1_scaffold_418_17
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14601..16025
DNA (1425bp) protein (475aa)
Beta-lactamase n=1 Tax=Blautia sp. KLE 1732 RepID=U2EBY2_9FIRM
Beta-lactamase {ECO:0000313|EMBL:ERI90186.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Beta-lactamase class C and other penicillin binding proteins
L2_019_244G1_scaffold_418_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16610..17290
DNA (681bp) protein (227aa)
TIGR00266 family protein n=3 Tax=Lachnospiraceae RepID=A7B5U6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44564.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
conserved hypothetical protein TIGR00266
L2_019_244G1_scaffold_418_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17300..17644
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44563.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_019_244G1_scaffold_418_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17681..18883)
DNA (1203bp) protein (401aa)
Hydrogenase maturation GTPase HydF n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UFU7_9FIRM
Hydrogenase maturation GTPase HydF {ECO:0000313|EMBL:CCZ67717.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_019_244G1_scaffold_418_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18901..20322)
DNA (1422bp) protein (474aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U961_9FIRM
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:CCZ67716.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
iron-only hydrogenase maturation protein HydG
L2_019_244G1_scaffold_418_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20362..21420)
DNA (1059bp) protein (353aa)
iron-only hydrogenase maturation protein HydE (EC:2.8.1.6)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67715.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_019_244G1_scaffold_418_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21493..21840
DNA (348bp) protein (116aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Acylphosphatases (EC:3.6.1.7)
Acylphosphatase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWM4_9FIRM
L2_019_244G1_scaffold_418_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21890..22681
DNA (792bp) protein (264aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPK2_9FIRM
L2_019_244G1_scaffold_418_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22714..23406
DNA (693bp) protein (231aa)
nrdG; ribonucleoside-triphosphate reductase-like protein (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase activating protein n=3 Tax=Lachnospiraceae RepID=A7B590_RUMGN
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:ETD17619.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_019_244G1_scaffold_418_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23471..24976
DNA (1506bp) protein (502aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BT54_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43655.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
peptidase S41
L2_019_244G1_scaffold_418_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25309..26655
DNA (1347bp) protein (449aa)
ABC transporter, solute-binding protein n=3 Tax=Lachnospiraceae RepID=A7B591_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44714.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_019_244G1_scaffold_418_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26721..27563
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67710.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_019_244G1_scaffold_418_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27563..28399
DNA (837bp) protein (279aa)
ABC transporter permease protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWL9_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCZ67709.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_019_244G1_scaffold_418_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28519..30057
DNA (1539bp) protein (513aa)
Response regulator receiver domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPJ7_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCZ67708.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
Displaying items 1-30 of 35 in total

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