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L2_019_244G1_scaffold_505

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_505_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..574
DNA (573bp) protein (191aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
ATP-dependent Clp protease proteolytic subunit 2 n=21 Tax=Bifidobacterium RepID=CLPP2_BIFLO
clpP2; clpp2
L2_019_244G1_scaffold_505_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

580..1281
DNA (702bp) protein (234aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
ATP-dependent Clp protease proteolytic subunit 1 n=15 Tax=Bifidobacterium RepID=CLPP1_BIFLO
L2_019_244G1_scaffold_505_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1403..2821
DNA (1419bp) protein (473aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=13 Tax=Bifidobacterium RepID=D6D926_BIFLN
ATP-dependent Clp protease ATP-binding subunit
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_019_244G1_scaffold_505_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3302..4720
DNA (1419bp) protein (473aa)
Na(+)/H(+) antiporter NhaA n=8 Tax=Bifidobacterium longum RepID=B3DSL0_BIFLD
sodium/proton antiporter, NhaA family (TC 2.A.33.1.1)
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_019_244G1_scaffold_505_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4953..5894
DNA (942bp) protein (314aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=V6Y0D1_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:ESV33284.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
hypothetical protein
L2_019_244G1_scaffold_505_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5940..6620)
DNA (681bp) protein (227aa)
Methyltransferase n=16 Tax=Bifidobacterium RepID=F8AR05_BIFLN
methyltransferase
O-methyltransferase {ECO:0000313|EMBL:EEI81481.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_019_244G1_scaffold_505_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6699..7664)
DNA (966bp) protein (322aa)
Succinate dehydrogenase iron-sulfur protein {ECO:0000313|EMBL:ESV33286.1}; EC=1.3.99.1 {ECO:0000313|EMBL:ESV33286.1};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Succinate dehydrogenase iron-sulfur protein n=1 Tax=Bifidobacterium longum E18 RepID=V6XXS5_BIFLN
succinate dehydrogenase iron-sulfur subunit
L2_019_244G1_scaffold_505_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7760..9625)
DNA (1866bp) protein (622aa)
SdhA n=16 Tax=Bifidobacterium RepID=E4QZ84_BIFLM
Succinate dehydrogenase {ECO:0000313|EMBL:AIW43633.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
sdhA; sdha
L2_019_244G1_scaffold_505_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9682..11382)
DNA (1701bp) protein (567aa)
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake n=4 Tax=Bifidobacterium longum RepID=S3DQ15_BIFLN
DNA protecting protein DprA {ECO:0000313|EMBL:KEY22055.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L2_019_244G1_scaffold_505_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11379..12914)
DNA (1536bp) protein (512aa)
Mg chelatase-related protein n=15 Tax=Bifidobacterium RepID=D6D919_BIFLN
hypothetical protein
ATPase AAA {ECO:0000313|EMBL:KEY22056.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_244G1_scaffold_505_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12973..13476)
DNA (504bp) protein (168aa)
UPF0102 protein BLJ_0797 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTQ7_BIFLJ
endonuclease
UPF0102 protein BL171B_02045 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_244G1_scaffold_505_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13713..14585)
DNA (873bp) protein (291aa)
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Pyridoxal/pyridoxine/pyridoxamine kinase n=11 Tax=Bifidobacterium RepID=D6D917_BIFLN
L2_019_244G1_scaffold_505_13
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15059..16213
DNA (1155bp) protein (385aa)
O-acetylhomoserine (Thiol)-lyase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NER7_9BIFI
O-acetylhomoserine (Thiol)-lyase {ECO:0000313|EMBL:CCY95866.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
O-acetylhomoserine (thiol)-lyase
L2_019_244G1_scaffold_505_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16611..16961
DNA (351bp) protein (117aa)
ABC-type antimicrobial peptide transport system, ATPase component n=4 Tax=Bifidobacterium longum subsp. longum RepID=D6D915_BIFLN
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBK70668.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Displaying 14 items

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