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L2_019_244G1_scaffold_516

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_516_1
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..1192)
DNA (1191bp) protein (397aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu (Fragment) n=4 Tax=Burkholderiales RepID=F3QMB3_9BURK
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; Flags: Fragment;; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
L2_019_244G1_scaffold_516_2
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1208..3310)
DNA (2103bp) protein (701aa)
Elongation factor G n=3 Tax=Proteobacteria RepID=D9Y4Z8_9BURK
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
Translation elongation factor G
L2_019_244G1_scaffold_516_3
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3368..3841)
DNA (474bp) protein (158aa)
30S ribosomal protein S7 n=3 Tax=Proteobacteria RepID=D9Y4Z7_9BURK
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
30S ribosomal protein S7
L2_019_244G1_scaffold_516_4
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists


comp(3950..4327)
DNA (378bp) protein (126aa)
30S ribosomal protein S12 n=2 Tax=Proteobacteria RepID=D9Y4Z6_9BURK
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
rpsL; 30S ribosomal protein S12
L2_019_244G1_scaffold_516_5
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4617..8864)
DNA (4248bp) protein (1416aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
DNA-directed RNA polymerase subunit beta' n=2 Tax=Burkholderiales RepID=D9Y4Z5_9BURK
DNA-directed RNA polymerase subunit beta'
L2_019_244G1_scaffold_516_6
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8861..12994)
DNA (4134bp) protein (1378aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=2 Tax=Burkholderiales RepID=D9Y4Z4_9BURK
L2_019_244G1_scaffold_516_7
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13224..13601)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=2 Tax=Burkholderiales RepID=D9Y4Z3_9BURK
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
50S ribosomal protein L7/L12
L2_019_244G1_scaffold_516_8
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists


comp(13650..14180)
DNA (531bp) protein (177aa)
50S ribosomal protein L10 n=3 Tax=Proteobacteria RepID=D9Y4Z2_9BURK
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
rplJ; 50S ribosomal protein L10
L2_019_244G1_scaffold_516_9
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14438..15130)
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=3 Tax=Proteobacteria RepID=D9Y4Z1_9BURK
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
50S ribosomal protein L1
L2_019_244G1_scaffold_516_10
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15130..15564)
DNA (435bp) protein (145aa)
50S ribosomal protein L11 n=3 Tax=Proteobacteria RepID=D9Y4Z0_9BURK
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
rplK; ribosomal protein L11
L2_019_244G1_scaffold_516_11
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15673..16209)
DNA (537bp) protein (179aa)
Transcription termination/antitermination protein NusG n=2 Tax=Burkholderiales RepID=D9Y4Y9_9BURK
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
nusG; transcription antitermination protein NusG
L2_019_244G1_scaffold_516_12
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(16222..16551)
DNA (330bp) protein (110aa)
Protein translocase subunit SecE n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AU28_9PROT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
preprotein translocase, SecE subunit
L2_019_244G1_scaffold_516_13
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16747..16842)
DNA (96bp) protein (32aa)
Elongation factor Tu C-terminal domain protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y4Y7_9BURK
Elongation factor Tu C-terminal domain protein {ECO:0000313|EMBL:EFL83015.1}; Flags: Fragment;; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
translation elongation factor EF-Tu
Displaying 13 items

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