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L2_019_244G1_scaffold_592

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_592_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..1338
DNA (1338bp) protein (446aa)
Putative ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MT32_BIFL1
sufB2; sufb2
FeS assembly protein SufB {ECO:0000313|EMBL:ESV33362.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_019_244G1_scaffold_592_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1344..2579
DNA (1236bp) protein (412aa)
ABC-type transport system for Fe-S cluster assembly permease component n=14 Tax=Bifidobacterium RepID=B3DSD2_BIFLD
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIW43694.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_244G1_scaffold_592_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2660..3283
DNA (624bp) protein (208aa)
FeS assembly ATPase SufC {ECO:0000313|EMBL:CCK34872.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCK34872.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
ABC-type transport system for Fe-S cluster assembly ATPase component n=16 Tax=Bifidobacterium RepID=B3DSD1_BIFLD
ABC transporter ATP-binding protein
L2_019_244G1_scaffold_592_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3422..4696
DNA (1275bp) protein (425aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Cysteine desulfurase n=10 Tax=Bifidobacterium RepID=B3DSD0_BIFLD
csdB; csdb
L2_019_244G1_scaffold_592_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4708..5262
DNA (555bp) protein (185aa)
Uncharacterized protein n=19 Tax=Bifidobacterium RepID=B3DSC9_BIFLD
hypothetical protein
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KEY32844.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_244G1_scaffold_592_6
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5269..5862
DNA (594bp) protein (198aa)
Predicted metal-sulfur cluster biosynthetic enzyme n=14 Tax=Bifidobacterium RepID=D6D8V4_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95938.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_019_244G1_scaffold_592_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5952..7196)
DNA (1245bp) protein (415aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Glucose-1-phosphate adenylyltransferase n=15 Tax=Bifidobacterium longum RepID=GLGC_BIFLD
glucose-1-phosphate adenylyltransferase
L2_019_244G1_scaffold_592_8
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7397..8275)
DNA (879bp) protein (293aa)
rRNA methylase n=11 Tax=Bifidobacterium RepID=B3DSC6_BIFLD
rRNA methyltransferase
SpoU rRNA methylase {ECO:0000313|EMBL:EFV37736.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_244G1_scaffold_592_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8519..9316
DNA (798bp) protein (266aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Ribosomal RNA small subunit methyltransferase E n=17 Tax=Bifidobacterium RepID=B3DSC5_BIFLD
hypothetical protein
L2_019_244G1_scaffold_592_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9365..9703
DNA (339bp) protein (113aa)
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases n=10 Tax=Bifidobacterium RepID=D6D8V0_BIFLN
hit2; hit2
Histidine triad (HIT) protein {ECO:0000313|EMBL:ADH00353.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_019_244G1_scaffold_592_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9776..10897
DNA (1122bp) protein (374aa)
Phosphate starvation-inducible protein n=15 Tax=Bifidobacterium RepID=B3DSC3_BIFLD
phosphate starvation-inducible protein
PhoH family protein {ECO:0000313|EMBL:EIJ24478.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_244G1_scaffold_592_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10887..11435
DNA (549bp) protein (183aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Endoribonuclease YbeY n=17 Tax=Bifidobacterium RepID=YBEY_BIFLD
hypothetical protein
L2_019_244G1_scaffold_592_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11511..12944
DNA (1434bp) protein (478aa)
Hemolysin-like protein n=13 Tax=Bifidobacterium longum RepID=B3DSC1_BIFLD
hypothetical protein
Membrane protein {ECO:0000313|EMBL:AIW43705.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_244G1_scaffold_592_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12946..14010
DNA (1065bp) protein (355aa)
GTPase Era n=11 Tax=Bifidobacterium longum RepID=B3DSC0_BIFLD
era; era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_019_244G1_scaffold_592_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14063..16096)
DNA (2034bp) protein (678aa)
Long-chain acyl-CoA synthetase n=3 Tax=Bifidobacterium longum RepID=B3DSB9_BIFLD
long-chain-fatty-acid-CoA ligase
Long-chain acyl-CoA synthetase {ECO:0000313|EMBL:ACD98038.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_244G1_scaffold_592_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16461..17528
DNA (1068bp) protein (356aa)
NAD/NADP transhydrogenase alpha subunit n=13 Tax=Bifidobacterium RepID=D6D8U6_BIFLN
NAD(P) transhydrogenase alpha-1 subunit
Putative NAD(P)(+) transhydrogenase (AB-specific), alpha subunit {ECO:0000313|EMBL:EEI81390.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_019_244G1_scaffold_592_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17544..17849
DNA (306bp) protein (102aa)
NAD(P) transhydrogenase alpha-2 subunit n=15 Tax=Bifidobacterium RepID=B7GS77_BIFLS
NAD(P) transhydrogenase alpha-2 subunit
NAD(P) transhydrogenase alpha-2 subunit {ECO:0000313|EMBL:BAP83473.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L2_019_244G1_scaffold_592_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17849..19273
DNA (1425bp) protein (475aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
NAD(P) transhydrogenase subunit beta n=12 Tax=Bifidobacterium RepID=B3DSB6_BIFLD
pntB; pntb
L2_019_244G1_scaffold_592_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19409..20446)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=Q8G5Z6_BIFLO
alpha/beta fold family hydrolase
Putative alpha/beta superfamily hydrolase {ECO:0000313|EMBL:ACD98034.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_244G1_scaffold_592_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


20875..21495
DNA (621bp) protein (207aa)
50S ribosomal protein L25 n=17 Tax=Bifidobacterium RepID=RL25_BIFLD
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_019_244G1_scaffold_592_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21720..21917
DNA (198bp) protein (66aa)
Branched-chain amino acid aminotransferase n=3 Tax=Bifidobacterium longum RepID=E8MI34_BIFL2
branched-chain amino acid aminotransferase
Ilve {ECO:0000313|EMBL:AEI97650.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Displaying 21 items

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