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L2_019_244G1_scaffold_593

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_593_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..103)
DNA (102bp) protein (34aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6D8Y4_BIFLN
ABC transporter ATP-binding protein
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:AHJ21042.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_019_244G1_scaffold_593_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(203..310)
DNA (108bp) protein (36aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=B3DSG7_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21041.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_019_244G1_scaffold_593_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

489..1841
DNA (1353bp) protein (451aa)
Signal transduction histidine kinase n=6 Tax=Bifidobacterium RepID=B3DSG8_BIFLD
Histidine kinase sensor of two-component system
Histidine kinase dimerization/phosphoacceptor domain protein {ECO:0000313|EMBL:EIJ24532.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_244G1_scaffold_593_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1841..2494
DNA (654bp) protein (218aa)
Response regulator of two-component system n=15 Tax=Bifidobacterium RepID=Q8G5U9_BIFLO
two-component response regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:KEY22086.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_244G1_scaffold_593_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2678..3301)
DNA (624bp) protein (208aa)
Phosphate transport regulator n=14 Tax=Bifidobacterium RepID=B3DSH0_BIFLD
hypothetical protein
Phosphate transport regulator {ECO:0000313|EMBL:ACD98089.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_244G1_scaffold_593_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3319..4371)
DNA (1053bp) protein (351aa)
Phosphate/sulphate permease n=15 Tax=Bifidobacterium RepID=B3DSH1_BIFLD
phosphate transport protein
Inorganic phosphate transporter PiT {ECO:0000313|EMBL:KEY22084.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_244G1_scaffold_593_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4491..4688)
DNA (198bp) protein (66aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DSH2_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY22083.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_244G1_scaffold_593_8
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4746..7145)
DNA (2400bp) protein (800aa)
Carbon starvation protein n=9 Tax=Bifidobacterium RepID=E8MHX6_BIFL2
CstA family carbon starvation transporter CsgG {ECO:0000313|EMBL:CCY96468.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
carbon starvation protein
L2_019_244G1_scaffold_593_9
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7390..8685
DNA (1296bp) protein (432aa)
Alpha amylase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5N3H4_9BIFI
Alpha amylase {ECO:0000313|EMBL:CCY96469.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
cyclomaltodextrinase or neopullalanase
L2_019_244G1_scaffold_593_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8714..9217)
DNA (504bp) protein (168aa)
AcrR-type transcriptional regulator n=11 Tax=Bifidobacterium RepID=B3DSH5_BIFLD
transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EIJ24501.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_244G1_scaffold_593_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9497..11635)
DNA (2139bp) protein (713aa)
DEAD/DEAH box helicase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GTP1_BIFLN
DEAD/DEAH box helicase {ECO:0000313|EMBL:EEI81448.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
ATP-dependent RNA helicase
L2_019_244G1_scaffold_593_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12025..13314)
DNA (1290bp) protein (430aa)
Xanthine/uracil permease n=8 Tax=Bifidobacterium RepID=B3DSH7_BIFLD
uraA2; uraa2
Permease family protein {ECO:0000313|EMBL:EIJ25430.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_244G1_scaffold_593_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13419..13730)
DNA (312bp) protein (104aa)
Phosphoglycerate mutase family protein n=15 Tax=Bifidobacterium RepID=B3DSH8_BIFLD
Fructose-2,6-bisphosphatase
Histidine phosphatase superfamily (Branch 1) {ECO:0000313|EMBL:EIJ30301.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_019_244G1_scaffold_593_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14154..14735)
DNA (582bp) protein (194aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=V6XVW3_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK70647.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_019_244G1_scaffold_593_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14891..15445
DNA (555bp) protein (185aa)
Helix-turn-helix n=6 Tax=Bifidobacterium RepID=D6D8Z5_BIFLN
Helix-turn-helix.
Transcriptional regulator {ECO:0000313|EMBL:AIW43652.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_244G1_scaffold_593_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15565..16728)
DNA (1164bp) protein (388aa)
Virion core protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I1I1_BIFLN
Virion core protein {ECO:0000313|EMBL:CCK34823.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Putative virion core protein (lumpy skin disease virus)
L2_019_244G1_scaffold_593_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16812..17048)
DNA (237bp) protein (79aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=C5EAJ2_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY22073.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_244G1_scaffold_593_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17102..18646)
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI000303535F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW43650.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_244G1_scaffold_593_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19080..19520
DNA (441bp) protein (147aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=Q8G5T6_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI81455.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_019_244G1_scaffold_593_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19582..20457
DNA (876bp) protein (292aa)
Kinase domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AUU9_BIFLN
Serine/threonine protein kinase {ECO:0000313|EMBL:KEY22070.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L2_019_244G1_scaffold_593_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20510..20977
DNA (468bp) protein (156aa)
Serine/threonine protein kinase n=2 Tax=Bifidobacterium longum RepID=S3E559_BIFLN
Serine/threonine protein kinase {ECO:0000313|EMBL:KEY32792.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L2_019_244G1_scaffold_593_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21015..22445)
DNA (1431bp) protein (477aa)
Putative transport protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MSY2_BIFL1
transport protein
Putative transport protein {ECO:0000313|EMBL:BAJ70876.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_019_244G1_scaffold_593_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22683..23096)
DNA (414bp) protein (138aa)
Putative multidrug resistance protein, induced upon bile salt exposure n=1 Tax=Bifidobacterium longum E18 RepID=V6XXU2_BIFLN
Drug resistance MFS transporter, drug:H+ antiporter-2 family {ECO:0000313|EMBL:EIJ30278.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
yhcA; putative transporter
Displaying 23 items

View Taxonomy