ggKbase home page

L2_019_244G1_scaffold_668

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_668_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..629)
DNA (627bp) protein (209aa)
pflA_2; Pyruvate formate-lyase 1-activating enzyme (EC:1.97.1.4)
YjjW family glycine radical enzyme activase n=5 Tax=Escherichia coli RepID=T7HRI1_ECOLX
YjjW family glycine radical enzyme activase {ECO:0000313|EMBL:EOW90219.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L2_019_244G1_scaffold_668_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(760..2109)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Escherichia coli 113303 RepID=U9XQK9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA64368.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
yjjI; hypothetical protein
L2_019_244G1_scaffold_668_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2367..3146
DNA (780bp) protein (260aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00592, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00592};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00592, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00592}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00592}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
Deoxyribose-phosphate aldolase n=296 Tax=Escherichia coli RepID=DEOC_ECO45
deoC; Deoxyribose-phosphate aldolase
L2_019_244G1_scaffold_668_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3224..4546
DNA (1323bp) protein (441aa)
deoA; thymidine phosphorylase (EC:2.4.2.4)
Thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01628, ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_01628, ECO:0000256|SAAS:SAAS00031985};; TdRPase {ECO:0000256|HAMAP-Rule:MF_01628}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
Thymidine phosphorylase n=50 Tax=Escherichia RepID=E2QLE2_ECOLX
L2_019_244G1_scaffold_668_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4598..5821
DNA (1224bp) protein (408aa)
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
Phosphopentomutase n=1128 Tax=Enterobacteriaceae RepID=DEOB_ECO24
L2_019_244G1_scaffold_668_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5878..6597
DNA (720bp) protein (240aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE37.;"
Purine nucleoside phosphorylase DeoD-type n=621 Tax=Enterobacteriaceae RepID=DEOD_ECO27
deoD; purine nucleoside phosphorylase DeoD
L2_019_244G1_scaffold_668_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6688..8019
DNA (1332bp) protein (444aa)
Uncharacterized protein yjjJ n=193 Tax=Escherichia coli RepID=E2QLE5_ECOLX
yjjJ; hypothetical protein
HipA-like N-terminal domain protein {ECO:0000313|EMBL:EZJ55219.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L2_019_244G1_scaffold_668_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8146..8931)
DNA (786bp) protein (262aa)
Lipoate-protein ligase A {ECO:0000256|HAMAP-Rule:MF_01602, ECO:0000256|SAAS:SAAS00214764}; EC=2.7.7.63 {ECO:0000256|HAMAP-Rule:MF_01602, ECO:0000256|SAAS:SAAS00026637};; Lipoate--protein ligase {ECO:0000256|HAMAP-Rule:MF_01602}; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3190-1.;"
Lipoate-protein ligase A n=65 Tax=Escherichia coli RepID=LPLA_ECOK1
lplA; lipoate-protein ligase A
L2_019_244G1_scaffold_668_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8959..9603)
DNA (645bp) protein (215aa)
Protein smp n=351 Tax=Escherichia RepID=E2QLE7_ECOLX
ytjB; hypothetical protein
Protein smp {ECO:0000313|EMBL:EQP97926.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L2_019_244G1_scaffold_668_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9709..10677
DNA (969bp) protein (323aa)
serB; phosphoserine phosphatase (EC:3.1.3.3)
Phosphoserine phosphatase n=290 Tax=Escherichia coli RepID=E2QLE8_ECOLX
Phosphoserine phosphatase {ECO:0000313|EMBL:ELE59099.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L2_019_244G1_scaffold_668_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10726..12108
DNA (1383bp) protein (461aa)
DNA repair protein radA n=1131 Tax=Enterobacteriaceae RepID=C3SE38_ECOLX
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L2_019_244G1_scaffold_668_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12129..13361
DNA (1233bp) protein (411aa)
nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1)
Transcriptional regulator NadR n=166 Tax=Escherichia RepID=A1AJV7_ECOK1
Trifunctional NAD biosynthesis/regulator protein NadR {ECO:0000313|EMBL:EQP97929.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L2_019_244G1_scaffold_668_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13453..13785
DNA (333bp) protein (111aa)
Uncharacterized protein n=107 Tax=Escherichia coli RepID=B7MNJ8_ECO45
hypothetical protein
Addiction module toxin HigB {ECO:0000313|EMBL:EHU29854.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L2_019_244G1_scaffold_668_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13787..14071
DNA (285bp) protein (95aa)
Uncharacterized protein n=313 Tax=Escherichia RepID=B7LNT2_ESCF3
DNA-binding protein
Helix-turn-helix family protein {ECO:0000313|EMBL:EZJ55226.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L2_019_244G1_scaffold_668_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14127..15794)
DNA (1668bp) protein (556aa)
Heme ABC exporter, ATP-binding protein CcmA {ECO:0000313|EMBL:KEJ53268.1}; EC=3.6.3.41 {ECO:0000313|EMBL:KEJ53268.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Uncharacterized ABC transporter ATP-binding protein yjjK n=311 Tax=Escherichia RepID=E2QLF2_ECOLX
yjjK; ABC transporter ATP-binding protein
L2_019_244G1_scaffold_668_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16001..17938
DNA (1938bp) protein (646aa)
slt; lytic murein transglycosylase (EC:3.2.1.-)
Murein transglycosylase {ECO:0000313|EMBL:CKH61979.1}; EC=4.2.2.- {ECO:0000313|EMBL:CKH61979.1};; Slt {ECO:0000313|EMBL:AJF45155.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Soluble lytic murein transglycosylase n=245 Tax=Escherichia coli RepID=E2QLF3_ECOLX
L2_019_244G1_scaffold_668_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18058..18354
DNA (297bp) protein (99aa)
Trp operon repressor n=336 Tax=Escherichia RepID=TRPR_ECO27
trpR; Trp operon repressor
Trp operon repressor {ECO:0000256|HAMAP-Rule:MF_00475, ECO:0000256|SAAS:SAAS00234182}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L2_019_244G1_scaffold_668_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18427..18954)
DNA (528bp) protein (176aa)
Non-canonical purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00648};; Non-standard purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; Nucleoside-triphosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Non-canonical purine NTP phosphatase n=32 Tax=Escherichia coli RepID=I4SP15_ECOLX
yjjX; inosine/xanthosine triphosphatase
L2_019_244G1_scaffold_668_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19006..19653
DNA (648bp) protein (216aa)
Probable phosphoglycerate mutase GpmB {ECO:0000256|HAMAP-Rule:MF_01040, ECO:0000256|SAAS:SAAS00013984}; EC=5.4.2.- {ECO:0000256|HAMAP-Rule:MF_01040};; PGAM {ECO:0000256|HAMAP-Rule:MF_01040}; Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01040}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Probable phosphoglycerate mutase GpmB n=348 Tax=Escherichia RepID=GPMB_ECO45
gpmB; phosphoglycerate mutase
L2_019_244G1_scaffold_668_20
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19650..19859)
DNA (210bp) protein (70aa)
Right origin-binding protein n=3 Tax=Escherichia coli RepID=M9AA99_ECOLX
rob; right oriC-binding transcriptional activator
Right origin-binding protein {ECO:0000313|EMBL:ABF06399.1}; TaxID=373384 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri serotype 5b (strain 8401).;"
Displaying 20 items

View Taxonomy