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L2_019_244G1_scaffold_40

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Displaying items 1-30 of 71 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_40_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(405..1259)
DNA (855bp) protein (285aa)
Bifunctional protein FolD n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPE6_9ACTN
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+)
L2_019_244G1_scaffold_40_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1262..1954)
DNA (693bp) protein (231aa)
Formiminotransferase-cyclodeaminase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A549_9ACTN
Formiminotransferase-cyclodeaminase {ECO:0000313|EMBL:CDA36257.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
methenyl tetrahydrofolate cyclohydrolase
L2_019_244G1_scaffold_40_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2274..2873
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAJ8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39521.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_019_244G1_scaffold_40_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3115..3708
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAJ7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39520.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_019_244G1_scaffold_40_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4014..6500
DNA (2487bp) protein (829aa)
Phosphatidylinositol-specific phospholipase C X domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI35_9ACTN
Phosphatidylinositol-specific phospholipase C X domain protein {ECO:0000313|EMBL:CDA36259.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Phosphatidylinositol-specific phospholipase C, X domain.
L2_019_244G1_scaffold_40_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6596..6865)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPE9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36261.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_019_244G1_scaffold_40_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7034..8083
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAJ2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39515.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_019_244G1_scaffold_40_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8479..9816)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z993_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36263.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_019_244G1_scaffold_40_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9888..11216
DNA (1329bp) protein (443aa)
Cation diffusion facilitator family transporter n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAI9_9ACTN
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EBA39512.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
cation diffusion facilitator family transporter
L2_019_244G1_scaffold_40_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11235..12224)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBK3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36265.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_019_244G1_scaffold_40_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12404..14071)
DNA (1668bp) protein (556aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Collinsella sp. CAG:166 PF4_9ACTN">RepID=R5ZPF4_9ACTN
L2_019_244G1_scaffold_40_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14216..15283)
DNA (1068bp) protein (356aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Collinsella sp. CAG:166 RepID=R6A560_9ACTN
Holliday junction DNA helicase subunit RuvB
L2_019_244G1_scaffold_40_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15283..15903)
DNA (621bp) protein (207aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z998_9ACTN
Holliday junction DNA helicase subunit RuvA
L2_019_244G1_scaffold_40_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15903..16424)
DNA (522bp) protein (174aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI44_9ACTN
L2_019_244G1_scaffold_40_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16562..18547)
DNA (1986bp) protein (662aa)
Putative NAD+ synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNH3_9ACTN
Putative NAD+ synthase {ECO:0000313|EMBL:CDA35926.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_019_244G1_scaffold_40_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18665..19027)
DNA (363bp) protein (121aa)
Putative superoxide reductase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A466_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74866.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
desulfoferrodoxin ferrous iron-binding region
L2_019_244G1_scaffold_40_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19178..22642)
DNA (3465bp) protein (1155aa)
SNF2 family N-terminal domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8B0_9ACTN
SNF2 family N-terminal domain protein {ECO:0000313|EMBL:CDA35928.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
helicase SNF2 family protein
L2_019_244G1_scaffold_40_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22805..26608)
DNA (3804bp) protein (1268aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAI0_9ACTN
L2_019_244G1_scaffold_40_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26785..30417)
DNA (3633bp) protein (1211aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ATP-dependent DNA helicase PcrA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAH9_9ACTN
UvrD/REP helicase
L2_019_244G1_scaffold_40_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30421..33516)
DNA (3096bp) protein (1032aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAH8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74870.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_019_244G1_scaffold_40_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33701..34000)
DNA (300bp) protein (100aa)
TrpR family protein YerC/YecD n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8B4_9ACTN
TrpR protein YerC/YecD {ECO:0000313|EMBL:KGI74871.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
TrpR-like protein YerC/YecD
L2_019_244G1_scaffold_40_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34325..34690
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAH6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74872.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_019_244G1_scaffold_40_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34832..35260)
DNA (429bp) protein (143aa)
Transcriptional regulator Rrf2 family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAS0_9ACTN
Transcriptional regulator Rrf2 family {ECO:0000313|EMBL:CDA35935.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transcriptional regulator, BadM/Rrf2 family
L2_019_244G1_scaffold_40_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35514..36452
DNA (939bp) protein (313aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAH3_9ACTN
L2_019_244G1_scaffold_40_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36633..37733
DNA (1101bp) protein (367aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAH2_9ACTN
L2_019_244G1_scaffold_40_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(37870..38913)
DNA (1044bp) protein (348aa)
M42 glutamyl aminopeptidase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAG9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74876.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Cellulase M and related proteins
L2_019_244G1_scaffold_40_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(39518..40684)
DNA (1167bp) protein (389aa)
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZH86_9ACTN
Lactaldehyde reductase {ECO:0000313|EMBL:CDA35939.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_019_244G1_scaffold_40_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(40850..41566)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAS5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35940.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
membrane protein
L2_019_244G1_scaffold_40_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

41649..43961
DNA (2313bp) protein (771aa)
UPF0313 protein COLAER_01422 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAG4_9ACTN
UPF0313 protein COLAER_01422 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Fe-S oxidoreductase
L2_019_244G1_scaffold_40_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(43958..44869)
DNA (912bp) protein (304aa)
CAAX amino terminal protease family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAG3_9ACTN
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EBA39486.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
CAAX amino terminal protease family protein
Displaying items 1-30 of 71 in total

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