ggKbase home page

L2_019_244G1_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 63 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_97_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(229..945)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Y6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39654.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_019_244G1_scaffold_97_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1062..3542
DNA (2481bp) protein (827aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit gamma and tau n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLP6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71729.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_019_244G1_scaffold_97_3
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3597..3857
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9L1L1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EOS49647.1}; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
hypothetical protein
L2_019_244G1_scaffold_97_4
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3850..4122
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9KTT0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EOS49646.1}; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
hypothetical protein
L2_019_244G1_scaffold_97_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4148..4624)
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=A4E9Y4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71730.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_019_244G1_scaffold_97_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4965..5285
DNA (321bp) protein (107aa)
Nucleoid-associated protein COLAER_01238 n=2 Tax=Collinsella RepID=A4E9Y3_9ACTN
Nucleoid-associated protein COLAER_01238 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_019_244G1_scaffold_97_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5299..5895
DNA (597bp) protein (199aa)
Recombination protein RecR n=2 Tax=Collinsella RepID=A4E9Y2_9ACTN
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
DNA replication and repair protein RecR
L2_019_244G1_scaffold_97_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6140..7045
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A1X7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71733.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_019_244G1_scaffold_97_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7042..8886
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Y0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71734.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
serine/threonine protein kinase
L2_019_244G1_scaffold_97_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8890..9828
DNA (939bp) protein (313aa)
FHA domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF30_9ACTN
FHA domain protein {ECO:0000313|EMBL:CDA35184.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_019_244G1_scaffold_97_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11211..12746
DNA (1536bp) protein (512aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAN1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71736.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
MdlB6; ABC-type multidrug/protein/lipid transport system, ATPase component
L2_019_244G1_scaffold_97_12
unknown

Not on your lists

13118..13243
DNA (126bp) protein (42aa)

This feature has no annotations

L2_019_244G1_scaffold_97_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14216..15010)
DNA (795bp) protein (265aa)
Radical SAM domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAN4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71738.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
radical SAM protein
L2_019_244G1_scaffold_97_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15018..15230)
DNA (213bp) protein (71aa)
Radical SAM domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAN4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71738.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
arylsulfatase regulator
L2_019_244G1_scaffold_97_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16013..16537
DNA (525bp) protein (175aa)
FHA domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF30_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71739.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_019_244G1_scaffold_97_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16988..20527
DNA (3540bp) protein (1180aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z630_9ACTN
pyruvate ferredoxin/flavodoxin oxidoreductase
L2_019_244G1_scaffold_97_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21182..22144
DNA (963bp) protein (321aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=2 Tax=Collinsella RepID=A4E9X5_9ACTN
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_019_244G1_scaffold_97_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22333..23334)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71742.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_019_244G1_scaffold_97_19
unknown

Not on your lists

23393..23653
DNA (261bp) protein (87aa)

This feature has no annotations

L2_019_244G1_scaffold_97_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23689..25140
DNA (1452bp) protein (484aa)
Amino acid permease n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71743.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
amino acid permease-associated protein
L2_019_244G1_scaffold_97_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25272..26549
DNA (1278bp) protein (426aa)
Amidohydrolase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71744.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
amidohydrolase
L2_019_244G1_scaffold_97_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26598..28052
DNA (1455bp) protein (485aa)
signal transduction histidine kinase LytS (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X1_9ACTN
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EBA39639.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_019_244G1_scaffold_97_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28091..28825
DNA (735bp) protein (245aa)
Response regulator receiver domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71746.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
LytTR family two component transcriptional regulator
L2_019_244G1_scaffold_97_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28918..29862
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39637.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_019_244G1_scaffold_97_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29964..31223
DNA (1260bp) protein (420aa)
Transporter, major facilitator family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W8_9ACTN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EBA39636.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_019_244G1_scaffold_97_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31395..32582
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71749.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_019_244G1_scaffold_97_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32579..33922
DNA (1344bp) protein (448aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Collinsella RepID=A4E9W6_9ACTN
signal transduction histidine kinase LytS
L2_019_244G1_scaffold_97_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34007..34711
DNA (705bp) protein (235aa)
Response regulator receiver domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZKA9_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA37049.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
LytTR family two component transcriptional regulator
L2_019_244G1_scaffold_97_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34807..35274
DNA (468bp) protein (156aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Phosphodiesterase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBE7_9ACTN
phosphodiesterase, MJ0936 family
L2_019_244G1_scaffold_97_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36121..36606
DNA (486bp) protein (162aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Collinsella RepID=A4E9W3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71753.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
asnc family transcriptional regulator
Displaying items 1-30 of 63 in total

View Taxonomy