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L2_019_244G1_scaffold_132

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Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_244G1_scaffold_132_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(324..3089)
DNA (2766bp) protein (922aa)
Efflux ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGM5_9ACTN
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDA35719.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L2_019_244G1_scaffold_132_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3095..3796)
DNA (702bp) protein (234aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E943_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA39788.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter
L2_019_244G1_scaffold_132_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3882..5261)
DNA (1380bp) protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Two component system histidine kinase n=1 Tax=Collinsella sp. CAG:289 RepID=R7D868_9ACTN
histidine kinase
L2_019_244G1_scaffold_132_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5264..5947)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D5Q2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74567.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_019_244G1_scaffold_132_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6158..7174
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E941_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39786.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_019_244G1_scaffold_132_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7208..8233)
DNA (1026bp) protein (342aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E940_9ACTN
L2_019_244G1_scaffold_132_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8408..9796)
DNA (1389bp) protein (463aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Aspartokinase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA56_9ACTN
aspartate kinase
L2_019_244G1_scaffold_132_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9856..11418
DNA (1563bp) protein (521aa)
Threonine synthase {ECO:0000313|EMBL:EBA39783.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EBA39783.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Threonine synthase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E938_9ACTN
threonine synthase
L2_019_244G1_scaffold_132_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11623..12504
DNA (882bp) protein (294aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Homoserine kinase n=2 Tax=Collinsella RepID=A4E937_9ACTN
homoserine kinase
L2_019_244G1_scaffold_132_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12793..13491)
DNA (699bp) protein (233aa)
DNA-binding helix-turn-helix protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E936_9ACTN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EBA39781.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Hypothetical protein with helix-turn-helix motif
L2_019_244G1_scaffold_132_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13457..14140)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E935_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39780.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_019_244G1_scaffold_132_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14241..14831)
DNA (591bp) protein (197aa)
Probable GTP-binding protein EngB n=2 Tax=Collinsella RepID=A4E934_9ACTN
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ribosome biogenesis GTP-binding protein YsxC
L2_019_244G1_scaffold_132_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14870..15610)
DNA (741bp) protein (247aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00131282}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00064821};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00064819}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00131176}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
methylthioadenosine nucleosidase (EC:3.2.2.16)
MTA/SAH nucleosidase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNX4_9ACTN
L2_019_244G1_scaffold_132_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15737..16576)
DNA (840bp) protein (280aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4M4_9ACTN
L2_019_244G1_scaffold_132_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16742..17596)
DNA (855bp) protein (285aa)
EDD domain protein DegV family n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8Q8_9ACTN
EDD domain protein DegV family {ECO:0000313|EMBL:CDA36053.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
degV family protein
L2_019_244G1_scaffold_132_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17872..19314)
DNA (1443bp) protein (481aa)
beta-fructofuranosidase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E929_9ACTN
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EBA39774.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_019_244G1_scaffold_132_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19416..20867)
DNA (1452bp) protein (484aa)
PTS system glucose-like IIB component n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB55_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74368.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PTS system, glucose subfamily, IIA component
L2_019_244G1_scaffold_132_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20913..22295)
DNA (1383bp) protein (461aa)
Glycosyl hydrolase family 32 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNX7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74369.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Beta-fructosidases (levanase/invertase)
L2_019_244G1_scaffold_132_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22479..23489)
DNA (1011bp) protein (337aa)
Transcriptional regulator LacI family n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4M8_9ACTN
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDA36057.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transcriptional regulator, LacI family
L2_019_244G1_scaffold_132_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23791..24042)
DNA (252bp) protein (84aa)
Glycine radical domain protein n=2 Tax=Collinsella RepID=A4E925_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74371.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
formate C-acetyltransferase glycine radical
L2_019_244G1_scaffold_132_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24128..26179)
DNA (2052bp) protein (684aa)
formate acetyltransferase (EC:2.3.1.54)
Formate C-acetyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPX0_9ACTN
Formate C-acetyltransferase {ECO:0000313|EMBL:CDA36431.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_019_244G1_scaffold_132_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26730..27179
DNA (450bp) protein (150aa)
Transcriptional regulator MarR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9P3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74373.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
MarR family transcriptional regulator
L2_019_244G1_scaffold_132_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27176..29545
DNA (2370bp) protein (790aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5N3_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA36427.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L2_019_244G1_scaffold_132_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29545..31401
DNA (1857bp) protein (619aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPW3_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA36426.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L2_019_244G1_scaffold_132_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31978..33009
DNA (1032bp) protein (344aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E915_9ACTN
L2_019_244G1_scaffold_132_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33542..35764)
DNA (2223bp) protein (741aa)
Efflux ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPG2_9ACTN
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDA36276.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_019_244G1_scaffold_132_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35754..36539)
DNA (786bp) protein (262aa)
ABC transporter, ATP-binding protein n=2 Tax=Collinsella RepID=A4E911_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA36277.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L2_019_244G1_scaffold_132_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36688..37677
DNA (990bp) protein (330aa)
DNA mismatch endonuclease Vsr n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9A7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74381.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
DNA mismatch endonuclease Vsr
L2_019_244G1_scaffold_132_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38175..39104
DNA (930bp) protein (310aa)
Transcriptional regulator, AraC family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E907_9ACTN
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EBA39752.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
AraC family transcriptional regulator
L2_019_244G1_scaffold_132_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

39161..39784
DNA (624bp) protein (208aa)
HAD hydrolase, family IA, variant 1 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E906_9ACTN
HAD hydrolase, family IA, variant 1 {ECO:0000313|EMBL:EBA39751.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
phosphoglycolate phosphatase
Displaying items 1-30 of 59 in total

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