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L2_021_000G1_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 158 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_18_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1698)
DNA (1698bp) protein (566aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Aconitate hydratase n=4 Tax=Bifidobacterium RepID=K2IR15_BIFBI
acn; aconitate hydratase
L2_021_000G1_scaffold_18_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1771..4311)
DNA (2541bp) protein (847aa)
Putative cation-transporting ATPase E n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WH34_BIFBI
ctpE; putative cation-transporting ATPase E
Putative cation-transporting ATPase E {ECO:0000313|EMBL:AFL04197.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_000G1_scaffold_18_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4609..5223)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V8P7_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR49989.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_021_000G1_scaffold_18_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5228..6490)
DNA (1263bp) protein (421aa)
tRNA (Uracil-5-)-methyltransferase {ECO:0000313|EMBL:KFI42688.1}; EC=2.1.1.190 {ECO:0000313|EMBL:KFI42688.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
tRNA (Uracil-5-) -methyltransferase (EC:2.1.1.35)
TRAM domain protein n=3 Tax=Bifidobacterium RepID=E4V8P6_BIFBI
L2_021_000G1_scaffold_18_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6516..7289)
DNA (774bp) protein (258aa)
ABC-type Mn2+/Zn2+ transport systems, permease component n=4 Tax=Bifidobacterium RepID=I3WH31_BIFBI
ABC-type Mn2+/Zn2+ transport systems, permease component
Uncharacterized protein {ECO:0000313|EMBL:ERI83085.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_000G1_scaffold_18_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7329..8150)
DNA (822bp) protein (274aa)
Uncharacterized protein n=5 Tax=Bifidobacterium bifidum RepID=I3WH30_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52844.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_000G1_scaffold_18_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8290..9147)
DNA (858bp) protein (286aa)
xth; exodeoxyribonuclease III (EC:3.1.11.2)
DNA-(Apurinic or apyrimidinic site) lyase {ECO:0000313|EMBL:AFL04192.1}; EC=4.2.99.18 {ECO:0000313|EMBL:AFL04192.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Xth Exodeoxyribonuclease III n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0U3_BIFBP
L2_021_000G1_scaffold_18_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9288..10706
DNA (1419bp) protein (473aa)
PepC Aminopeptidase C {ECO:0000313|EMBL:KFI42684.1}; EC=3.4.22.40 {ECO:0000313|EMBL:KFI42684.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Bleomycin hydrolase C n=2 Tax=Bifidobacterium bifidum RepID=E3ENW7_BIFBS
pepC1; bleomycin hydrolase C
L2_021_000G1_scaffold_18_9
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10865..12655)
DNA (1791bp) protein (597aa)
Putative peptide ABC transporter solute-binding protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GM41_9BIFI
Putative peptide ABC transporter solute-binding protein {ECO:0000313|EMBL:CDB22729.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
putative peptide ABC transporter solute-binding protein
L2_021_000G1_scaffold_18_10
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12819..15035)
DNA (2217bp) protein (739aa)
oppD; oligopeptide transport ATP-binding protein OppD (EC:3.6.3.24)
Oligopeptide transport ATP-binding protein OppD n=2 Tax=Bifidobacterium bifidum RepID=K2MUX8_BIFBI
OppD Oligopeptide transport ATP-binding protein {ECO:0000313|EMBL:CDB22728.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_000G1_scaffold_18_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15035..15979)
DNA (945bp) protein (315aa)
Peptide/nickel transport system, permease protein n=6 Tax=Bifidobacterium bifidum RepID=E3ENW4_BIFBS
oppC; oligopeptide transport system permease protein oppC
Putative oligopeptide ABC transporter, permease protein OppC {ECO:0000313|EMBL:EFR49981.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_021_000G1_scaffold_18_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16001..16984)
DNA (984bp) protein (328aa)
Peptide/nickel transport system, permease protein n=7 Tax=Bifidobacterium RepID=E3ENW3_BIFBS
oppB; oligopeptide transport system permease protein OppB
Putative peptide transport permease protein {ECO:0000313|EMBL:EKF15846.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_000G1_scaffold_18_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17392..18396)
DNA (1005bp) protein (335aa)
Tyrosine recombinase XerC n=2 Tax=Bifidobacterium bifidum RepID=I3WH23_BIFBI
xerC; tyrosine recombinase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_000G1_scaffold_18_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18482..18733
DNA (252bp) protein (84aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WH22_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52836.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_000G1_scaffold_18_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18808..19671)
DNA (864bp) protein (288aa)
tyrA; prephenate dehydrogenase (EC:1.3.1.12)
TyrA Prephenate dehydrogenase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0T0_BIFBP
Prephenate dehydrogenase {ECO:0000313|EMBL:ADO52835.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_000G1_scaffold_18_16
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19839..20870)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6H907_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22722.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
chorismate mutase
L2_021_000G1_scaffold_18_17
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20867..21400)
DNA (534bp) protein (178aa)
Alcohol dehydrogenase class IV n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GN93_9BIFI
alcohol dehydrogenase
Alcohol dehydrogenase class IV {ECO:0000313|EMBL:CDB22721.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_000G1_scaffold_18_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21920..23842)
DNA (1923bp) protein (641aa)
typA; GTP-binding protein TypA (EC:2.7.7.4)
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:KFI42674.1}; EC=3.6.5.- {ECO:0000313|EMBL:KFI42674.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
GTP-binding protein TypA/BipA n=7 Tax=Bifidobacterium RepID=E4P0S7_BIFBP
L2_021_000G1_scaffold_18_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24023..25300)
DNA (1278bp) protein (426aa)
iscS; putative cysteine desulfurase (EC:2.8.1.7)
Putative cysteine desulfurase {ECO:0000313|EMBL:AFL04180.1}; EC=2.8.1.7 {ECO:0000313|EMBL:AFL04180.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Putative cysteine desulfurase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WH17_BIFBI
L2_021_000G1_scaffold_18_20
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25303..26196)
DNA (894bp) protein (298aa)
nadC; nicotinate-nucleotide pyrophosphorylase NadC (EC:2.4.2.19)
NadC Nicotinate-nucleotide pyrophosphorylase n=5 Tax=Bifidobacterium RepID=E4P0S5_BIFBP
NadC Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:CDB22717.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_000G1_scaffold_18_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26330..27979)
DNA (1650bp) protein (550aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L-aspartate oxidase n=4 Tax=Bifidobacterium bifidum RepID=E3ENV4_BIFBS
nadB; L-aspartate oxidase
L2_021_000G1_scaffold_18_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28032..29312)
DNA (1281bp) protein (427aa)
nadA; quinolinate synthetase A NadA (EC:2.5.1.72)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Quinolinate synthase A n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0S3_BIFBP
L2_021_000G1_scaffold_18_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29430..30212)
DNA (783bp) protein (261aa)
phosphohydrolase (EC:3.6.1.13)
Phosphohydrolase (MutT/nudix family protein) n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0S2_BIFBP
Phosphohydrolase (MutT/nudix family protein) {ECO:0000313|EMBL:ADO52827.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_000G1_scaffold_18_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30416..30988)
DNA (573bp) protein (191aa)
Segregation and condensation protein B n=3 Tax=Bifidobacterium bifidum RepID=E3ENV1_BIFBS
scpB; segregation and condensation protein ScpB
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_000G1_scaffold_18_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31085..31939)
DNA (855bp) protein (285aa)
Segregation and condensation protein A n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HSW7_BIFBI
scpA; segregation and condensation protein A
Segregation and condensation protein A {ECO:0000313|EMBL:EKE50538.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_021_000G1_scaffold_18_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31976..32995)
DNA (1020bp) protein (340aa)
Chromosome partitioning protein n=5 Tax=Bifidobacterium bifidum RepID=E3ENU9_BIFBS
chromosome partitioning protein
Chromosome partitioning protein {ECO:0000313|EMBL:ADO52824.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_000G1_scaffold_18_27
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33057..34025)
DNA (969bp) protein (323aa)
Tyrosine recombinase XerD n=5 Tax=Bifidobacterium RepID=E3ENU8_BIFBS
xerD; Integrase/recombinase
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_000G1_scaffold_18_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(34174..34557)
DNA (384bp) protein (128aa)
50S ribosomal protein L20 n=8 Tax=Bifidobacterium RepID=E3ENU7_BIFBS
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_021_000G1_scaffold_18_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(34605..34799)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=8 Tax=Bifidobacterium RepID=E3ENU6_BIFBS
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_021_000G1_scaffold_18_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34818..35549)
DNA (732bp) protein (244aa)
Translation initiation factor IF-3 n=9 Tax=Bifidobacterium RepID=E3ENU5_BIFBS
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
infC; protein translation Initiation Factor 3
Displaying items 1-30 of 158 in total

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