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L2_021_000G1_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_30_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

191..442
DNA (252bp) protein (84aa)
Uncharacterized protein n=6 Tax=Bifidobacterium bifidum RepID=I3WKI1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI44105.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_021_000G1_scaffold_30_2
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(575..817)
DNA (243bp) protein (81aa)
chromate reductase/NADPH-dependent FMN reductase/Oxygen-insensitive NADPH nitroreductase (EC:1.6.99.3)
Nitroreductase n=2 Tax=Bifidobacterium RepID=R6GG53_9BIFI
Nitroreductase {ECO:0000313|EMBL:CDB23405.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_000G1_scaffold_30_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(789..1355)
DNA (567bp) protein (189aa)
Nitroreductase family protein n=2 Tax=Bifidobacterium bifidum RepID=E3ERE6_BIFBS
Nitroreductase family protein
Nitroreductase family protein {ECO:0000313|EMBL:EKE50066.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_021_000G1_scaffold_30_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1613..2065)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WKH9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL05392.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_000G1_scaffold_30_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2114..2803
DNA (690bp) protein (230aa)
Phosphoglycerate mutase family protein n=5 Tax=Bifidobacterium RepID=E3ERE4_BIFBS
phoE; putative phosphoglycerate mutase
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:ADO53948.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_000G1_scaffold_30_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2809..2988
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=U2DMM2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53947.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_000G1_scaffold_30_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3150..4172)
DNA (1023bp) protein (341aa)
HTH-type transcriptional regulator n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WKH5_BIFBI
regA; HTH-type transcriptional regulator
HTH-type transcriptional regulator {ECO:0000313|EMBL:AFL05388.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_000G1_scaffold_30_8
unknown

Not on your lists

comp(4337..4474)
DNA (138bp) protein (46aa)

This feature has no annotations

L2_021_000G1_scaffold_30_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4505..6637
DNA (2133bp) protein (711aa)
alkaline phosphatase n=1 Tax=Bifidobacterium bifidum RepID=UPI0001976FEA
Alkaline phosphatase {ECO:0000313|EMBL:BAQ98995.1}; Alkaline phosphatase family protein {ECO:0000313|EMBL:ERI82790.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
alkaline phosphatase
L2_021_000G1_scaffold_30_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7015..8898
DNA (1884bp) protein (628aa)
Chaperone protein DnaK n=7 Tax=Bifidobacterium bifidum RepID=E3ERE0_BIFBS
dnaK; chaperone protein dnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_021_000G1_scaffold_30_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8901..9605
DNA (705bp) protein (235aa)
Protein GrpE n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I5P4_BIFBI
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
grpE; molecular chaperone GrpE
L2_021_000G1_scaffold_30_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10065..11072
DNA (1008bp) protein (336aa)
DnaJ domain protein n=4 Tax=Bifidobacterium bifidum RepID=E4VAZ8_BIFBI
dnaJ1; chaperone protein dnaJ
Chaperone protein dnaJ {ECO:0000313|EMBL:EKF15027.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_000G1_scaffold_30_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11166..11678
DNA (513bp) protein (171aa)
Putative heat shock protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MSD1_BIFBI
hspR; putative heat shock protein
Putative heat shock protein {ECO:0000313|EMBL:EKF15028.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_000G1_scaffold_30_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12034..14538
DNA (2505bp) protein (835aa)
exo-alpha-sialidase (EC:3.2.1.18)
BNR/Asp-box repeat protein n=2 Tax=Bifidobacterium bifidum RepID=E4VB00_BIFBI
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EFR50765.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_021_000G1_scaffold_30_15
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14850..20222
DNA (5373bp) protein (1791aa)
exo-alpha-sialidase (EC:3.2.1.18)
Exo-alpha-sialidase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GKU0_9BIFI
Exo-alpha-sialidase {ECO:0000313|EMBL:CDB22229.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_000G1_scaffold_30_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20455..21240
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQQ3_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53937.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_000G1_scaffold_30_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21736..22434)
DNA (699bp) protein (233aa)
DedA integral membrane protein n=2 Tax=Bifidobacterium RepID=K2MC78_BIFBI
hypothetical protein
DedA integral membrane protein {ECO:0000313|EMBL:EKF14892.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_000G1_scaffold_30_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22704..23705
DNA (1002bp) protein (334aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
S-adenosylmethionine-dependent methyltransferase, YraL family n=3 Tax=Bifidobacterium bifidum RepID=E4VB05_BIFBI
uroporphyrin-III C/tetrapyrrole
L2_021_000G1_scaffold_30_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23707..24138)
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=E4VB06_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI44088.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_021_000G1_scaffold_30_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24236..25066)
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=I3WKG3_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL05376.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_000G1_scaffold_30_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


25216..27078
DNA (1863bp) protein (621aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Methionine--tRNA ligase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0F2_BIFBP
L2_021_000G1_scaffold_30_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27348..27863
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=U2CFI1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI82773.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_000G1_scaffold_30_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28610..28894)
DNA (285bp) protein (95aa)
Putative solute-binding lipo protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WKG0_BIFBI
putative solute-binding lipo protein
Putative solute-binding lipo protein {ECO:0000313|EMBL:AFL05373.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_000G1_scaffold_30_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29084..30538
DNA (1455bp) protein (485aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQP5_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53929.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_000G1_scaffold_30_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30714..31673
DNA (960bp) protein (320aa)
DNase, TatD family n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQP4_BIFBS
TatD family Dnase
DNase, TatD family {ECO:0000313|EMBL:ADO53928.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_000G1_scaffold_30_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31837..34299
DNA (2463bp) protein (821aa)
Probable potassium transport system protein kup n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2BX42_BIFBI
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
K+ transporter
L2_021_000G1_scaffold_30_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35517..36383
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=E3EQP1_BIFBS
putative glutamine amido transferase
Putative glutamine amido transferase {ECO:0000313|EMBL:AFL05367.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_000G1_scaffold_30_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36587..37333
DNA (747bp) protein (249aa)
Metal dependent phosphohydrolase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WKF3_BIFBI
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AFL05366.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_000G1_scaffold_30_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37411..38730)
DNA (1320bp) protein (440aa)
ABC-type sugar transport system {ECO:0000313|EMBL:KFI44079.1}; EC=3.6.3.17 {ECO:0000313|EMBL:KFI44079.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CE10_BIFBI
ABC transporter ATP-binding protein
L2_021_000G1_scaffold_30_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38727..40160)
DNA (1434bp) protein (478aa)
SalY-type ABC antimicrobial peptide transportsystem permease component n=2 Tax=Bifidobacterium bifidum RepID=K2I864_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI44078.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
SalY-type ABC antimicrobial peptide transportsystem permease component
Displaying items 1-30 of 126 in total

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