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L2_021_000G1_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_39_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(551..955)
DNA (405bp) protein (135aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZH9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15930.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_021_000G1_scaffold_39_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1015..1350)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHK8_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82181.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_000G1_scaffold_39_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1432..1806)
DNA (375bp) protein (125aa)
Spore cortex biosynthesis protein YabQ n=4 Tax=Clostridium perfringens RepID=Q0TMH6_CLOP1
yabQ; spore cortex biosynthesis protein YabQ
Spore cortex biosynthesis protein YabQ {ECO:0000313|EMBL:EDT27241.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_000G1_scaffold_39_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1816..2115)
DNA (300bp) protein (100aa)
Sporulation protein YabP n=4 Tax=Clostridium perfringens RepID=H7CZI2_CLOPF
yabP; sporulation protein YabP
Sporulation protein YabP {ECO:0000313|EMBL:EIA15933.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_021_000G1_scaffold_39_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2246..2506)
DNA (261bp) protein (87aa)
S4 domain-containing protein n=7 Tax=Clostridium perfringens RepID=H7CZI3_CLOPF
S4 domain-containing protein
S4 domain-containing protein {ECO:0000313|EMBL:EIA15934.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_021_000G1_scaffold_39_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2614..2889)
DNA (276bp) protein (92aa)
DNA-binding protein HU n=8 Tax=Clostridium perfringens RepID=H7CZI4_CLOPF
hup; DNA-binding protein HU
Probable DNA binding protein {ECO:0000313|EMBL:BAB82185.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_000G1_scaffold_39_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3106..4557)
DNA (1452bp) protein (484aa)
MazG family protein n=2 Tax=Clostridium perfringens RepID=B1BS93_CLOPF
MazG family protein {ECO:0000313|EMBL:EDT15346.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
nucleotide pyrophosphohydrolase
L2_021_000G1_scaffold_39_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4587..6119)
DNA (1533bp) protein (511aa)
Stage V sporulation protein B n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVF9_CLOPF
Stage V sporulation protein B {ECO:0000313|EMBL:EIA15907.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
spoVB; stage V sporulation protein B
L2_021_000G1_scaffold_39_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6312..6860)
DNA (549bp) protein (183aa)
Stage V sprulation protein T n=5 Tax=Clostridium perfringens RepID=Q0SQ69_CLOPS
spoVT; stage V sprulation protein T
Stage V sprulation protein T {ECO:0000313|EMBL:EDT24336.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_021_000G1_scaffold_39_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7055..8083)
DNA (1029bp) protein (343aa)
prsA; peptidyl-prolyl isomerase (EC:5.2.1.8)
Foldase protein PrsA {ECO:0000255|HAMAP-Rule:MF_01145}; EC=5.2.1.8 {ECO:0000255|HAMAP-Rule:MF_01145};; Flags: Precursor;; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Foldase protein PrsA n=3 Tax=Clostridium perfringens RepID=H1CVG1_CLOPF
L2_021_000G1_scaffold_39_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8184..11672)
DNA (3489bp) protein (1163aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Transcription-repair-coupling factor n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V007_CLOPF
mfd; transcription-repair coupling factor
L2_021_000G1_scaffold_39_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11721..12287)
DNA (567bp) protein (189aa)
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Peptidyl-tRNA hydrolase n=10 Tax=Clostridium perfringens RepID=PTH_CLOP1
L2_021_000G1_scaffold_39_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12320..13570)
DNA (1251bp) protein (417aa)
PDZ domain protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHV4_CLOPF
PDZ domain protein {ECO:0000313|EMBL:EDS80633.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
PDZ domain-containing protein
L2_021_000G1_scaffold_39_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13591..15000)
DNA (1410bp) protein (470aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Sensor histidine kinase n=2 Tax=Clostridium perfringens RepID=B1BSA0_CLOPF
two-component sensor histidine kinase
L2_021_000G1_scaffold_39_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15000..15686)
DNA (687bp) protein (229aa)
DNA-binding response regulator n=6 Tax=Clostridium perfringens RepID=H7CZJ3_CLOPF
DNA-binding response regulator {ECO:0000313|EMBL:EIA15914.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
DNA-binding response regulator
L2_021_000G1_scaffold_39_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15959..16918)
DNA (960bp) protein (320aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHV1_CLOPF
prs; ribose-phosphate pyrophosphokinase
L2_021_000G1_scaffold_39_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16975..18339)
DNA (1365bp) protein (455aa)
Bifunctional protein GlmU {ECO:0000255|HAMAP-Rule:MF_01631}; Includes:; UDP-N-acetylglucosamine pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_01631}; EC=2.7.7.23 {ECO:0000255|HAMAP-Rule:MF_01631};; N-acetylglucosamine-1-phosphate uridyltransferase {ECO:0000255|HAMAP-Rule:MF_01631}; Includes:; Glucosamine-1-phosphate N-acetyltransferase {ECO:0000255|HAMAP-Rule:MF_01631}; EC=2.3.1.157 {ECO:0000255|HAMAP-Rule:MF_01631};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Bifunctional protein GlmU n=2 Tax=Clostridium perfringens RepID=GLMU_CLOPE
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
L2_021_000G1_scaffold_39_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18549..18821)
DNA (273bp) protein (91aa)
Putative septation protein SpoVG n=10 Tax=Clostridium perfringens RepID=SP5G_CLOP1
regulatory protein SpoVG
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_000G1_scaffold_39_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18932..19735)
DNA (804bp) protein (268aa)
Probable transcriptional repressor of purine operon n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHJ1_CLOPE
purR; pur operon repressor
Probable transcriptional repressor of purine operon {ECO:0000313|EMBL:BAB82198.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_000G1_scaffold_39_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20095..21468
DNA (1374bp) protein (458aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Clostridium perfringens F262 RepID=H7CZJ8_CLOPF
L2_021_000G1_scaffold_39_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21680..22699
DNA (1020bp) protein (340aa)
Sugar-binding transcriptional regulator, LacI family n=9 Tax=Clostridium perfringens RepID=Q0TMF9_CLOP1
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDT15380.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_000G1_scaffold_39_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22814..23632
DNA (819bp) protein (273aa)
punA; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Purine nucleoside phosphorylase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQ56_CLOPS
L2_021_000G1_scaffold_39_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23712..24938
DNA (1227bp) protein (409aa)
Nucleoside transporter, NupC family n=2 Tax=Clostridium perfringens RepID=B1BHU4_CLOPF
nucleoside transporter
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_021_000G1_scaffold_39_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25015..26091)
DNA (1077bp) protein (359aa)
Metallopeptidase, family M24 n=2 Tax=Clostridium perfringens RepID=B1BHU3_CLOPF
metallopeptidase, family M24
Probable proline dipeptidase {ECO:0000313|EMBL:BAB82203.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_000G1_scaffold_39_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26266..26964
DNA (699bp) protein (233aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Ser/Thr protein phosphatase family protein n=2 Tax=Clostridium perfringens RepID=B1RFM1_CLOPF
Ser/Thr protein phosphatase
L2_021_000G1_scaffold_39_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27104..28318)
DNA (1215bp) protein (405aa)
Heme/steroid binding domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZZ2_CLOPF
Heme/steroid binding domain protein {ECO:0000313|EMBL:EDT72888.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
heme/steroid binding domain-containing protein
L2_021_000G1_scaffold_39_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28730..30127
DNA (1398bp) protein (466aa)
asnC; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Asparagine--tRNA ligase n=9 Tax=Clostridium perfringens RepID=SYN_CLOP1
L2_021_000G1_scaffold_39_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30241..31722)
DNA (1482bp) protein (494aa)
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRW5_CLOPF
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_021_000G1_scaffold_39_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31871..32422)
DNA (552bp) protein (184aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZK7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15403.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_000G1_scaffold_39_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32552..33061)
DNA (510bp) protein (170aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHI1_CLOPE
nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein
Displaying items 1-30 of 122 in total

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