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L2_021_000G1_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_56_1
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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242..1060
DNA (819bp) protein (273aa)
Transporter, cation channel family protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JN97_9BACE
Transporter, cation channel family protein {ECO:0000313|EMBL:EDU99565.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
cation channel family protein
L2_021_000G1_scaffold_56_2
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1064..1525
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V7N2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86553.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
threonyl/alanyl tRNA synthetase SAD
L2_021_000G1_scaffold_56_3
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1538..2461
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W1D0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86552.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
DNA/RNA non-specific endonuclease
L2_021_000G1_scaffold_56_4
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2488..2913)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VSR3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86551.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L2_021_000G1_scaffold_56_5
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2861..2989)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXH6_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY96111.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L2_021_000G1_scaffold_56_6
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3003..4379)
DNA (1377bp) protein (459aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXH5_BACPM
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EDY96110.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
NodT family RND efflux system outer membrane lipoprotein
L2_021_000G1_scaffold_56_7
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4423..5421)
DNA (999bp) protein (333aa)
RND transporter, HAE1 family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXH4_BACPM
RND transporter, HAE1 family {ECO:0000313|EMBL:EDY96109.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
multidrug transporter AcrB
L2_021_000G1_scaffold_56_8
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5442..7559)
DNA (2118bp) protein (706aa)
RND transporter, HAE1 family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXH4_BACPM
RND transporter, HAE1 family {ECO:0000313|EMBL:EDY96109.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
L2_021_000G1_scaffold_56_9
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7571..8689)
DNA (1119bp) protein (373aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXH3_BACPM
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EDY96108.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
RND family efflux transporter MFP subunit
L2_021_000G1_scaffold_56_10
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8912..9808
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V870_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86545.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
AraC family transcriptional regulator
L2_021_000G1_scaffold_56_11
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9817..10491)
DNA (675bp) protein (225aa)
ABC transporter, ATP-binding protein n=2 Tax=Bacteroides RepID=B5CXH1_BACPM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDY96106.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
putative ABC transporter ATP-binding protein
L2_021_000G1_scaffold_56_12
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10517..12886)
DNA (2370bp) protein (790aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V7M5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86543.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
multidrug ABC transporter substrate-binding protein
L2_021_000G1_scaffold_56_13
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12912..14459)
DNA (1548bp) protein (516aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDY96104.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EDY96104.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Antioxidant, AhpC/TSA family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXG9_BACPM
alkyl hydroperoxide reductase
L2_021_000G1_scaffold_56_14
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14498..16906)
DNA (2409bp) protein (803aa)
Efflux ABC transporter, permease protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXG7_BACPM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDY96102.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
multidrug ABC transporter substrate-binding protein
L2_021_000G1_scaffold_56_15
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16927..19275)
DNA (2349bp) protein (783aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R6ZZ77_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD48604.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
hypothetical protein
L2_021_000G1_scaffold_56_16
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19293..21674)
DNA (2382bp) protein (794aa)
Efflux ABC transporter, permease protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXG5_BACPM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDY96100.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L2_021_000G1_scaffold_56_17
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21713..24091)
DNA (2379bp) protein (793aa)
Efflux ABC transporter, permease protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXG3_BACPM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDY96098.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
ABC transporter
L2_021_000G1_scaffold_56_18
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24147..25100)
DNA (954bp) protein (318aa)
Sel1 repeat protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXG2_BACPM
Sel1 repeat protein {ECO:0000313|EMBL:EDY96097.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L2_021_000G1_scaffold_56_19
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25297..26547)
DNA (1251bp) protein (417aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Bacteroides RepID=B5CXG1_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ86539.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
ABC transporter permease
L2_021_000G1_scaffold_56_20
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26560..28029)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V7M0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86538.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
membrane protein
L2_021_000G1_scaffold_56_21
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28208..29578
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W1C0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86537.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
two-component system response regulator
L2_021_000G1_scaffold_56_22
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29575..30849
DNA (1275bp) protein (425aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXF8_BACPM
two-component system sensor histidine kinase
L2_021_000G1_scaffold_56_23
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30867..32021)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXF7_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY96092.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
6-phosphogluconolactonase
L2_021_000G1_scaffold_56_24
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(32413..32763)
DNA (351bp) protein (117aa)
50S ribosomal protein L20 n=4 Tax=Bacteroides RepID=B5CXF6_BACPM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
rplT; 50S ribosomal protein L20
L2_021_000G1_scaffold_56_25
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(32873..33070)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXF5_BACPM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
50S ribosomal protein L35
L2_021_000G1_scaffold_56_26
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33143..33724)
DNA (582bp) protein (194aa)
Translation initiation factor IF-3 n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXF4_BACPM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
infC; translation initiation factor IF-3
L2_021_000G1_scaffold_56_27
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33826..35766)
DNA (1941bp) protein (647aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Threonine--tRNA ligase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXF3_BACPM
threonyl-tRNA synthetase
L2_021_000G1_scaffold_56_28
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35841..37844)
DNA (2004bp) protein (668aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXF2_BACPM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDY96087.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L2_021_000G1_scaffold_56_29
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37841..38395)
DNA (555bp) protein (185aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V7L0_9BACE
L2_021_000G1_scaffold_56_30
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38417..38851)
DNA (435bp) protein (145aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Putative Holliday junction resolvase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W1B3_9BACE
Holliday junction resolvase
Displaying items 1-30 of 91 in total

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