ggKbase home page

L2_021_000G1_scaffold_58

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_58_1
unknown

Not on your lists

2..76
DNA (75bp) protein (25aa)

This feature has no annotations

L2_021_000G1_scaffold_58_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

182..436
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HIA4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS29672.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L2_021_000G1_scaffold_58_3
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

665..952
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=G1UMH0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX27554.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_021_000G1_scaffold_58_4
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(958..1818)
DNA (861bp) protein (287aa)
Transcriptional regulator, AraC family n=7 Tax=Bacteroides RepID=C6Z4Q5_9BACE
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CDF17923.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_021_000G1_scaffold_58_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2092..3153)
DNA (1062bp) protein (354aa)
3-dehydroquinate synthase {ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.- {ECO:0000256|SAAS:SAAS00272647};; EC=4.2.3.4 {ECO:0000256|SAAS:SAAS00210855};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
3-dehydroquinate synthase n=2 Tax=Bacteroides RepID=R7P0N3_9BACE
3-dehydroquinate synthase
L2_021_000G1_scaffold_58_6
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3209..3655
DNA (447bp) protein (149aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C3REP9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO47508.2}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
hypothetical protein
L2_021_000G1_scaffold_58_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3736..6633
DNA (2898bp) protein (966aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HHV4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS03638.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L2_021_000G1_scaffold_58_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6726..8162
DNA (1437bp) protein (479aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Cardiolipin synthetase n=6 Tax=Bacteroides RepID=E5V0B5_9BACE
cardiolipin synthetase
L2_021_000G1_scaffold_58_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8131..8691)
DNA (561bp) protein (187aa)
RNA methyltransferase, RsmD family n=6 Tax=Bacteroides RepID=D4VCA4_BACVU
Conserved hypothetical 95 family protein {ECO:0000313|EMBL:KDS56581.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
methyltransferase
L2_021_000G1_scaffold_58_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8682..9506)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UG72_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY81521.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L2_021_000G1_scaffold_58_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9509..10195)
DNA (687bp) protein (229aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L1L6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY81520.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_021_000G1_scaffold_58_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10293..11711
DNA (1419bp) protein (473aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z4P7_9BACE
ATP-dependent exodeoxyribonuclease
Viral (Super1) RNA helicase family protein {ECO:0000313|EMBL:KDS56578.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_021_000G1_scaffold_58_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(12033..14648)
DNA (2616bp) protein (872aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Alanine--tRNA ligase n=4 Tax=Bacteroides vulgatus RepID=SYA_BACV8
L2_021_000G1_scaffold_58_14
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14791..15759
DNA (969bp) protein (323aa)
Peptidase, M23 family n=6 Tax=Bacteroides RepID=C6Z4P5_9BACE
peptidase
Putative peptidase {ECO:0000313|EMBL:CDF17913.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_021_000G1_scaffold_58_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15793..16140
DNA (348bp) protein (116aa)
Transcriptional regulator n=7 Tax=Bacteroides RepID=A6L1M0_BACV8
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EIY81516.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_021_000G1_scaffold_58_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16232..18502)
DNA (2271bp) protein (757aa)
GTP pyrophosphokinase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L1M1_BACV8
GTP pyrophosphokinase
GTP pyrophosphokinase {ECO:0000313|EMBL:ABR39585.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_021_000G1_scaffold_58_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18604..19866)
DNA (1263bp) protein (421aa)
Membrane-bound lytic murein transglycosylase D n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HHU3_BACVU
Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:EOS03628.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
glycoside hydrolase
L2_021_000G1_scaffold_58_18
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19871..20578)
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C3Q5U1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET15905.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L2_021_000G1_scaffold_58_19
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20648..21544)
DNA (897bp) protein (299aa)
ParB-like protein n=16 Tax=root RepID=D4VCB4_BACVU
chromosome partitioning protein ParB
Putative chromosome partitioning protein ParB {ECO:0000313|EMBL:CDF17908.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_021_000G1_scaffold_58_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21548..22315)
DNA (768bp) protein (256aa)
ParA family ATPase n=9 Tax=root RepID=A6L1M5_BACV8
ParA family ATPase
Chromosome partitioning protein {ECO:0000313|EMBL:EOS03625.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_021_000G1_scaffold_58_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22573..23346
DNA (774bp) protein (258aa)
surE; stationary phase survival protein SurE (EC:3.1.3.2)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
5'-nucleotidase SurE n=6 Tax=Bacteroides RepID=SURE_BACV8
L2_021_000G1_scaffold_58_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23343..24482
DNA (1140bp) protein (380aa)
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:KDS56567.1}; EC=2.4.1.182 {ECO:0000313|EMBL:KDS56567.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Lipid-A-disaccharide synthase n=6 Tax=root RepID=C6Z4N7_9BACE
glycosyltransferase family lipid-alpha-disaccharide synthase
L2_021_000G1_scaffold_58_23
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24539..25273
DNA (735bp) protein (245aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z4N6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV65177.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L2_021_000G1_scaffold_58_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25265..26104)
DNA (840bp) protein (280aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Phosphatidate cytidylyltransferase n=7 Tax=Bacteroides RepID=A6L1M9_BACV8
phosphatidate cytidylyltransferase
L2_021_000G1_scaffold_58_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26263..28233)
DNA (1971bp) protein (657aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
ATP-dependent zinc metalloprotease FtsH n=4 Tax=Bacteroides RepID=D4VCC0_BACVU
metalloprotease FtsH
L2_021_000G1_scaffold_58_26
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28287..28646)
DNA (360bp) protein (120aa)
Ribosomal silencing factor RsfS n=7 Tax=Bacteroides RepID=A6L1N1_BACV8
hypothetical protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_021_000G1_scaffold_58_27
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29193..31001)
DNA (1809bp) protein (603aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L1N2_BACV8
Uncharacterized protein {ECO:0000313|EMBL:EET15896.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L2_021_000G1_scaffold_58_28
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31262..32602)
DNA (1341bp) protein (447aa)
Magnesium transporter n=14 Tax=Bacteroides RepID=C3Q5T1_9BACE
magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_021_000G1_scaffold_58_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(32634..33476)
DNA (843bp) protein (281aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Ribosomal RNA small subunit methyltransferase A n=3 Tax=Bacteroides RepID=C6Z4N0_9BACE
ksgA; dimethyladenosine transferase
L2_021_000G1_scaffold_58_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33575..34579
DNA (1005bp) protein (335aa)
Uncharacterized protein n=7 Tax=root RepID=C6Z4M9_9BACE
dolichol-P-glucose synthetase
Uncharacterized protein {ECO:0000313|EMBL:EIY81501.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Displaying items 1-30 of 106 in total

View Taxonomy