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L2_021_000G1_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_82_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..202)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAI0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50622.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_021_000G1_scaffold_82_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(202..480)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VAH9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50621.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_021_000G1_scaffold_82_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

538..1623
DNA (1086bp) protein (362aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZM1_BIFBR
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type {ECO:0000313|EMBL:EDN81965.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Peptidyl-prolyl cis-trans isomerase
L2_021_000G1_scaffold_82_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1769..2620)
DNA (852bp) protein (284aa)
Hydrolase (HAD superfamily) n=2 Tax=Bifidobacterium bifidum RepID=E3EMF8_BIFBS
hydrolase
Hydrolase (HAD superfamily) {ECO:0000313|EMBL:ADO53394.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_000G1_scaffold_82_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2817..3323
DNA (507bp) protein (169aa)
Methionine import ATP-binding protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MFV1_BIFBI
Methionine import ATP-binding protein {ECO:0000313|EMBL:EKF16077.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
metN; methionine import ATP-binding protein
L2_021_000G1_scaffold_82_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3360..4511
DNA (1152bp) protein (384aa)
Amidohydrolase n=3 Tax=Bifidobacterium bifidum RepID=U2DQ53_BIFBI
ytnL; putative hydrolase
Amidohydrolase {ECO:0000313|EMBL:ERI83697.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98434.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_000G1_scaffold_82_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4594..6291
DNA (1698bp) protein (566aa)
Glutamine-dependent NAD(+) synthetase n=2 Tax=Bifidobacterium bifidum RepID=E3EMF5_BIFBS
nadE; glutamine-dependent NAD(+) synthetase
Glutamine-dependent NAD(+) synthetase {ECO:0000313|EMBL:ADO53391.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_000G1_scaffold_82_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6369..6605
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=U2CGP5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ98432.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_000G1_scaffold_82_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6725..9100
DNA (2376bp) protein (792aa)
pflB; formate acetyl transferase (EC:2.3.1.54)
Formate acetyltransferase n=5 Tax=Bifidobacterium bifidum RepID=E3EMF3_BIFBS
Formate C-acetyltransferase {ECO:0000313|EMBL:ERI83694.1}; Formate acetyltransferase {ECO:0000313|EMBL:BAQ98431.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_000G1_scaffold_82_10
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9292..10173
DNA (882bp) protein (294aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Pyruvate formate-lyase 1-activating enzyme n=6 Tax=Bifidobacterium RepID=I3WIP9_BIFBI
L2_021_000G1_scaffold_82_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10270..10899
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=U2DQ50_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83692.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_021_000G1_scaffold_82_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10889..12175
DNA (1287bp) protein (429aa)
ribonuclease D (EC:3.1.13.5)
Ribonuclease D n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXL3_BIFBP
Ribonuclease D {ECO:0000313|EMBL:EKF16569.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_000G1_scaffold_82_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12228..13613
DNA (1386bp) protein (462aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Trigger factor n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXL2_BIFBP
tig; trigger factor, ppiase
L2_021_000G1_scaffold_82_14
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13819..15222
DNA (1404bp) protein (468aa)
Chloride channel protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXL1_BIFBP
chloride channel protein
Chloride channel protein {ECO:0000313|EMBL:CDB21960.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_000G1_scaffold_82_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15295..15753)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MS65_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF14978.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_000G1_scaffold_82_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16059..16640
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
ATP-dependent Clp protease proteolytic subunit n=8 Tax=Bifidobacterium RepID=E3EME7_BIFBS
clp1; ATP-dependent Clp protease proteolytic subunit 1
L2_021_000G1_scaffold_82_17
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16646..17365
DNA (720bp) protein (240aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
clpP2; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6G934_9BIFI
L2_021_000G1_scaffold_82_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17465..18778
DNA (1314bp) protein (438aa)
ATP-dependent Clp protease ATP-binding subunit (EC:3.6.1.3)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXK8_BIFBP
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_000G1_scaffold_82_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19208..20392
DNA (1185bp) protein (395aa)
metC; cystathionine beta-lyase (EC:4.4.1.8)
Cystathionine beta-lyase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2LCL0_BIFBI
Cystathionine beta-lyase {ECO:0000313|EMBL:EKF15584.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_000G1_scaffold_82_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21111..22379
DNA (1269bp) protein (423aa)
Na(+)/H(+) antiporter NhaA n=2 Tax=Bifidobacterium bifidum RepID=E4NXK6_BIFBP
nhaA; Na+/H+ antiporter NhaA
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_000G1_scaffold_82_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22431..23372
DNA (942bp) protein (314aa)
TIGR00730 family protein n=7 Tax=Bifidobacterium bifidum RepID=E4VAG1_BIFBI
putative Rossmann fold nucleotide-binding protein
Putative Rossmann fold nucleotide-binding protein {ECO:0000313|EMBL:AFL04752.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_000G1_scaffold_82_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23369..24040)
DNA (672bp) protein (224aa)
O-methyl transferase n=2 Tax=Bifidobacterium bifidum RepID=I3WIN8_BIFBI
mdmC; O-methyl transferase
O-methyltransferase {ECO:0000313|EMBL:ERI83680.1}; Putative methyltransferase {ECO:0000313|EMBL:BAQ98418.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_000G1_scaffold_82_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24086..25057)
DNA (972bp) protein (324aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CI18_BIFBI
SdhB Succinate dehydrogenase iron-sulfur protein {ECO:0000313|EMBL:KFI43243.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
sdhB; succinate dehydrogenase iron-sulfur protein
L2_021_000G1_scaffold_82_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25279..25752
DNA (474bp) protein (158aa)
UPF0102 protein BBPR_1221 n=5 Tax=Bifidobacterium RepID=E4NXK2_BIFBP
endonuclease
UPF0102 protein B217_08611 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_000G1_scaffold_82_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25752..27281
DNA (1530bp) protein (510aa)
Mg chelatase, subunit ChlI n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WIN5_BIFBI
Mg chelatase subunit ChlI
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:AFL04748.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_000G1_scaffold_82_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27278..28792
DNA (1515bp) protein (505aa)
Putative DNA processing protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WIN4_BIFBI
putative DNA processing protein
Putative DNA processing protein {ECO:0000313|EMBL:AFL04747.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_000G1_scaffold_82_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29160..31406
DNA (2247bp) protein (749aa)
SdhA Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:KFI43238.1}; EC=1.3.5.1 {ECO:0000313|EMBL:KFI43238.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMD6_BIFBS
sdhA; succinate dehydrogenase flavoprotein subunit
L2_021_000G1_scaffold_82_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31552..32427)
DNA (876bp) protein (292aa)
pdxK; pyridoxine kinase (EC:2.7.1.35)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
Pyridoxine kinase n=7 Tax=Bifidobacterium bifidum RepID=E3EMD5_BIFBS
L2_021_000G1_scaffold_82_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32682..33536
DNA (855bp) protein (285aa)
Transporter n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MCT0_BIFBI
Transporter {ECO:0000313|EMBL:EKF15092.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
transporter
L2_021_000G1_scaffold_82_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33782..35098
DNA (1317bp) protein (439aa)
O-acetylhomoserine (thiol)-lyase (EC:2.5.1.49)
O-acetylhomoserine (Thiol)-lyase n=6 Tax=Bifidobacterium bifidum RepID=E3EMD3_BIFBS
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:ERI83668.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Displaying items 1-30 of 98 in total

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