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L2_021_000G1_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_85_1
unknown

Not on your lists

comp(563..652)
DNA (90bp) protein (30aa)

This feature has no annotations

L2_021_000G1_scaffold_85_2
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1122..2384
DNA (1263bp) protein (421aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M1I7_9CLOT
amino acid/amide ABC transporter substrate-binding protein, HAAT family
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:AGF59480.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_021_000G1_scaffold_85_3
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2408..3283
DNA (876bp) protein (292aa)
Inner-membrane translocator n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUP1_CLOC7
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADL50946.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L2_021_000G1_scaffold_85_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3293..4264
DNA (972bp) protein (324aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U3S0_9CLOT
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:EKQ55921.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
inner-membrane translocator
L2_021_000G1_scaffold_85_5
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4268..5026
DNA (759bp) protein (253aa)
Sulfate-transporting ATPase {ECO:0000313|EMBL:EHI96874.1}; EC=3.6.3.25 {ECO:0000313|EMBL:EHI96874.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Sulfate-transporting ATPase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAW6_9CLOT
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
L2_021_000G1_scaffold_85_6
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5029..5733
DNA (705bp) protein (235aa)
Fe(3+)-transporting ATPase {ECO:0000313|EMBL:EHI96875.1}; EC=3.6.3.30 {ECO:0000313|EMBL:EHI96875.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Fe(3+)-transporting ATPase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAW7_9CLOT
ABC transporter
L2_021_000G1_scaffold_85_7
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6092..6823
DNA (732bp) protein (244aa)
glutamine amidotransferase n=1 Tax=Clostridium beijerinckii RepID=UPI0002E13D5A
peptidase C26
Glutamine amidotransferase {ECO:0000313|EMBL:ETD70467.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_021_000G1_scaffold_85_8
Lysinibacillus fusiformis, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7088..7861
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Lysinibacillus fusiformis RepID=D7WY78_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EFI66628.1}; TaxID=714961 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus fusiformis ZC1.;"
hypothetical protein
L2_021_000G1_scaffold_85_9
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7997..8662
DNA (666bp) protein (222aa)
HAD-superfamily hydrolase subfamily IA variant 3 n=1 Tax=Clostridium sp. CAG:265 RepID=R6KHG6_9CLOT
HAD-superfamily hydrolase subfamily IA variant 3 {ECO:0000313|EMBL:CDB74638.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
haloacid dehalogenase superfamily enzyme, subfamily IA
L2_021_000G1_scaffold_85_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8764..9939)
DNA (1176bp) protein (392aa)
Transporter, major facilitator family n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBE0_CLOBU
Transporter, major facilitator family {ECO:0000313|EMBL:EEP56075.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
major facilitator superfamily protein
L2_021_000G1_scaffold_85_11
unknown

Not on your lists

10170..10448
DNA (279bp) protein (93aa)

This feature has no annotations

L2_021_000G1_scaffold_85_12
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10620..11324
DNA (705bp) protein (235aa)
Multimeric flavodoxin WrbA n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EI41_CLOPA
Flavin reductase {ECO:0000313|EMBL:KEZ90469.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
NADPH-dependent FMN reductase
L2_021_000G1_scaffold_85_13
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11374..12630)
DNA (1257bp) protein (419aa)
MATE efflux family protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4T2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM69970.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_021_000G1_scaffold_85_14
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12860..13690
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG83_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM69969.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_021_000G1_scaffold_85_15
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13830..14324)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FK17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG00969.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L2_021_000G1_scaffold_85_16
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14477..15010)
DNA (534bp) protein (178aa)
Isochorismatase family protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PTT9_9CLOT
Isochorismatase hydrolase {ECO:0000313|EMBL:EET87329.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
isochorismatase
L2_021_000G1_scaffold_85_17
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15162..16028
DNA (867bp) protein (289aa)
Transcriptional regulator n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WDE2_DESOD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AET67911.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L2_021_000G1_scaffold_85_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16094..16690)
DNA (597bp) protein (199aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
FMN-dependent NADH-azoreductase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKH7_CELLD
NAD(P)H dehydrogenase (quinone)
L2_021_000G1_scaffold_85_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17023..18006)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YPE4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86196.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_021_000G1_scaffold_85_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18011..18532)
DNA (522bp) protein (174aa)
RNA polymerase sigma-70 factor family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q5A8_9CLOT
RNA polymerase sigma-70 factor family {ECO:0000313|EMBL:EKY22885.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_021_000G1_scaffold_85_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18708..19931)
DNA (1224bp) protein (408aa)
Putative transport protein n=2 Tax=Clostridium butyricum RepID=B1R0Y0_CLOBU
Putative transport protein {ECO:0000313|EMBL:EEP56567.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
putative transport protein
L2_021_000G1_scaffold_85_22
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20271..21194)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Staphylococcus lentus RepID=UPI0002FBC14A
Uncharacterized protein {ECO:0000313|EMBL:EZX21671.1}; TaxID=1413510 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus C0673.;"
PEP phosphonomutase
L2_021_000G1_scaffold_85_23
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21236..22096)
DNA (861bp) protein (287aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N297_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45352.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_021_000G1_scaffold_85_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22074..22829)
DNA (756bp) protein (252aa)
Copper homeostasis protein CutC n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K388_CLOBU
Copper homeostasis protein CutC {ECO:0000313|EMBL:ETI88475.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Uncharacterized protein involved in copper resistance
L2_021_000G1_scaffold_85_25
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22835..23941)
DNA (1107bp) protein (369aa)
Putative dipeptidase n=2 Tax=Coprobacillus RepID=H1AP48_9FIRM
Putative dipeptidase {ECO:0000313|EMBL:EHQ45350.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
dipeptidase, putative
L2_021_000G1_scaffold_85_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23943..24899)
DNA (957bp) protein (319aa)
glycosylasparaginase precursor. Threonine peptidase. MEROPS family T02 (EC:3.5.1.26 3.5.1.1)
Asparaginase n=5 Tax=Erysipelotrichaceae RepID=B0N294_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33766.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_021_000G1_scaffold_85_27
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24946..25470)
DNA (525bp) protein (175aa)
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB). (EC:1.21.4.2)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N293_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19853.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L2_021_000G1_scaffold_85_28
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25482..26834)
DNA (1353bp) protein (451aa)
Putative PTS system, cellobiose-specific IIC component n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N292_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
PTS system, lactose/cellobiose family IIC component
L2_021_000G1_scaffold_85_29
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26854..27180)
DNA (327bp) protein (109aa)
PTS system cellobiose-specific transporter subunit IIB (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=4 Tax=Erysipelotrichaceae RepID=B0N291_9FIRM
PTS system, lactose/cellobiose family IIB component {ECO:0000313|EMBL:EHM90794.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_021_000G1_scaffold_85_30
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27274..27588)
DNA (315bp) protein (105aa)
Phosphotransferase system cellobiose-specific component IIA (EC:2.7.1.69)
PTS system Lactose/Cellobiose specific IIA subunit n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9H0_9FIRM
PTS system Lactose/Cellobiose specific IIA subunit {ECO:0000313|EMBL:CCZ25208.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Displaying items 1-30 of 111 in total

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