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L2_021_000G1_scaffold_93

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_93_1
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..131)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1H7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40091.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L2_021_000G1_scaffold_93_2
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(414..617)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9KA13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40277.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_021_000G1_scaffold_93_3
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(607..1047)
DNA (441bp) protein (147aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K166_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS40093.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_021_000G1_scaffold_93_4
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1400..1831)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K0Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40094.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L2_021_000G1_scaffold_93_5
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1849..2274)
DNA (426bp) protein (142aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1F9_9FIRM
L2_021_000G1_scaffold_93_6
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2324..2665)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K249_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40281.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_021_000G1_scaffold_93_7
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2681..3625)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K9F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40097.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
StbA protein.
L2_021_000G1_scaffold_93_8
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3737..4294)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1S4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40283.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_021_000G1_scaffold_93_9
unknown

Not on your lists

comp(4276..4449)
DNA (174bp) protein (58aa)

This feature has no annotations

L2_021_000G1_scaffold_93_10
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4778..5005)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BBU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82402.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L2_021_000G1_scaffold_93_11
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5163..5447)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31804.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L2_021_000G1_scaffold_93_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5500..6213)
DNA (714bp) protein (238aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BZW1_RUMGN
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CCZ66342.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
DNA internalization-related competence protein ComEC/Rec2
L2_021_000G1_scaffold_93_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6216..7145)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TKT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66343.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Spore germination protein
L2_021_000G1_scaffold_93_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7156..8547)
DNA (1392bp) protein (464aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Signal transduction histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TST8_9FIRM
L2_021_000G1_scaffold_93_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8585..9277)
DNA (693bp) protein (231aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5TKW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66345.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_021_000G1_scaffold_93_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9300..9935)
DNA (636bp) protein (212aa)
ComE operon protein 1 n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U5E3_9FIRM
ComE operon protein 1 {ECO:0000313|EMBL:CCZ66346.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
competence protein ComEA helix-hairpin-helix repeat region
L2_021_000G1_scaffold_93_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10063..10494)
DNA (432bp) protein (144aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B492_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48760.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_021_000G1_scaffold_93_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10562..11746)
DNA (1185bp) protein (395aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
acetylornithine and succinylornithine aminotransferases (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TKU3_9FIRM
L2_021_000G1_scaffold_93_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11736..12635)
DNA (900bp) protein (300aa)
Acetylglutamate kinase {ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.- {ECO:0000256|SAAS:SAAS00277142};; EC=2.7.2.8 {ECO:0000256|SAAS:SAAS00245383};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=3 Tax=Lachnospiraceae RepID=A7B494_RUMGN
L2_021_000G1_scaffold_93_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12681..13904)
DNA (1224bp) protein (408aa)
glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=3 Tax=Lachnospiraceae RepID=F7JT13_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_021_000G1_scaffold_93_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13922..14368)
DNA (447bp) protein (149aa)
N-acetylglutamate synthase (EC:2.3.1.1)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U5E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66351.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_021_000G1_scaffold_93_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14394..15434)
DNA (1041bp) protein (347aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
N-acetyl-gamma-glutamyl-phosphate reductase, common form (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=4 Tax=Clostridiales RepID=A7B498_RUMGN
L2_021_000G1_scaffold_93_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15584..16834)
DNA (1251bp) protein (417aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TKU8_9FIRM
L2_021_000G1_scaffold_93_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16858..17745)
DNA (888bp) protein (296aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=4 Tax=Clostridiales RepID=A7B4A0_RUMGN
L2_021_000G1_scaffold_93_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17780..18295)
DNA (516bp) protein (172aa)
Isochorismatase family protein {ECO:0000313|EMBL:EDN77178.1}; EC=3.-.-.- {ECO:0000313|EMBL:EDN77178.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Isochorismatase family protein n=3 Tax=Clostridiales RepID=A7B4A1_RUMGN
Amidases related to nicotinamidase
L2_021_000G1_scaffold_93_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18574..19794
DNA (1221bp) protein (407aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U5F2_9FIRM
L2_021_000G1_scaffold_93_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19862..21124)
DNA (1263bp) protein (421aa)
Putative permease n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B4A5_RUMGN
Putative permease {ECO:0000313|EMBL:EDN77182.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
uracil-xanthine permease
L2_021_000G1_scaffold_93_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21220..22161)
DNA (942bp) protein (314aa)
membrane dipeptidase (EC:3.4.13.19)
Renal dipeptidase family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TKV5_9FIRM
Renal dipeptidase family protein {ECO:0000313|EMBL:CCZ66358.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_021_000G1_scaffold_93_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22255..22980
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66359.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted glutamine amidotransferases
L2_021_000G1_scaffold_93_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23014..24315)
DNA (1302bp) protein (434aa)
PDZ/DHR/GLGF domain protein n=2 Tax=Clostridiales RepID=A7B7E4_RUMGN
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:CCZ66360.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Displaying items 1-30 of 148 in total

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