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L2_021_000G1_scaffold_139

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Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_139_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(579..1235)
DNA (657bp) protein (219aa)
Putative membrane protein n=2 Tax=Clostridium perfringens RepID=B1RR14_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT70212.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_021_000G1_scaffold_139_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1922..3121
DNA (1200bp) protein (400aa)
Peptidase, M23/M37 family n=2 Tax=Clostridium perfringens RepID=Q0TUN5_CLOP1
M24/M37 family peptidase
Peptidase, M23/M37 family {ECO:0000313|EMBL:EDS79649.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_021_000G1_scaffold_139_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3344..4207
DNA (864bp) protein (288aa)
5'-nucleotidase n=3 Tax=Clostridium perfringens RepID=H7CRZ7_CLOPF
5'-nucleotidase {ECO:0000313|EMBL:EIA18553.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
5'-nucleotidase
L2_021_000G1_scaffold_139_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4411..4608)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0SWH8_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15497.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_000G1_scaffold_139_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5159..6016)
DNA (858bp) protein (286aa)
Energy-coupling factor transporter ATP-binding protein EcfA2 {ECO:0000255|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA2 {ECO:0000255|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000255|HAMAP-Rule:MF_01710};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Energy-coupling factor transporter ATP-binding protein EcfA2 n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=ECFA2_CLOPS
cbiO; cobalt transporter ATP-binding subunit
L2_021_000G1_scaffold_139_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6031..6801)
DNA (771bp) protein (257aa)
Cobalt ABC transporter, permease protein CbiQ n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RR06_CLOPF
Cobalt ABC transporter, permease protein CbiQ {ECO:0000313|EMBL:EDT15514.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
cbiQ; cobalt ABC transporter permease CbiQ
L2_021_000G1_scaffold_139_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6785..7096)
DNA (312bp) protein (104aa)
Cobalt transport protein CbiN n=10 Tax=Clostridium perfringens RepID=CBIN_CLOPE
cbiN; cobalt transport protein CbiN
Cobalt transport protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; Energy-coupling factor transporter probable substrate-capture protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_000G1_scaffold_139_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7096..7839)
DNA (744bp) protein (248aa)
Cobalt transport protein CbiM n=8 Tax=Clostridium perfringens RepID=H7CRZ0_CLOPF
cbiM; cobalt transport protein CbiM
Cobalt transport protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Energy-coupling factor transporter probable substrate-capture protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Flags: Precursor;; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_000G1_scaffold_139_9
unknown

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comp(8548..8664)
DNA (117bp) protein (39aa)

This feature has no annotations

L2_021_000G1_scaffold_139_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8716..13602)
DNA (4887bp) protein (1629aa)
Hyaluronidase {ECO:0000313|EMBL:EDT72384.1}; EC=3.2.1.35 {ECO:0000313|EMBL:EDT72384.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Hyaluronidase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V170_CLOPF
nagH; hyaluronidase
L2_021_000G1_scaffold_139_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13859..14248
DNA (390bp) protein (130aa)
Putative membrane protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS07_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT15478.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_021_000G1_scaffold_139_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14447..15286)
DNA (840bp) protein (280aa)
Uncharacterized HTH-type transcriptional regulator CPE0189 n=9 Tax=Clostridium perfringens RepID=Y189_CLOPE
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDT15444.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_000G1_scaffold_139_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15477..16364)
DNA (888bp) protein (296aa)
ROK family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKM4_CLOPF
ROK family protein {ECO:0000313|EMBL:EDS79663.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
ROK family protein
L2_021_000G1_scaffold_139_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16520..16972)
DNA (453bp) protein (151aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=B1BS10_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15485.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_000G1_scaffold_139_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17083..18600)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XNZ2_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79892.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_000G1_scaffold_139_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18703..19569)
DNA (867bp) protein (289aa)
nanA; N-acetylneuraminate lyase (EC:4.1.3.3)
N-acetylneuraminate lyase; Short=NAL;; Short=Neu5Ac lyase;; EC=4.1.3.3;; N-acetylneuraminate pyruvate-lyase; N-acetylneuraminic acid aldolase; Sialate lyase; Sialic acid aldolase; Sialic acid lyase; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
N-acetylneuraminate lyase n=7 Tax=Clostridium perfringens RepID=NANA_CLOP1
L2_021_000G1_scaffold_139_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19606..20271)
DNA (666bp) protein (222aa)
nanE; N-acetylmannosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=7 Tax=Clostridium perfringens RepID=NANE_CLOP1
L2_021_000G1_scaffold_139_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20556..21224)
DNA (669bp) protein (223aa)
Nitroreductase family protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V178_CLOPF
Nitroreductase family protein {ECO:0000313|EMBL:EDT72436.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
nitroreductase
L2_021_000G1_scaffold_139_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21493..22560
DNA (1068bp) protein (356aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium perfringens RepID=B1RQZ5_CLOPF
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT15495.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter ATP-binding protein
L2_021_000G1_scaffold_139_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22563..23381
DNA (819bp) protein (273aa)
Putative ABC transporter, permease protein n=2 Tax=Clostridium perfringens RepID=B1RFB0_CLOPF
Putative ABC transporter, permease protein {ECO:0000313|EMBL:EDT27281.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ABC transporter permease
L2_021_000G1_scaffold_139_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23386..24177
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R7B6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23867.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_021_000G1_scaffold_139_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24561..25535)
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CW22_CLOPF
lipA; lipase
Probable lipase {ECO:0000313|EMBL:BAB79885.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_000G1_scaffold_139_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25886..26341)
DNA (456bp) protein (152aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
S-ribosylhomocysteine lyase n=1 Tax=Clostridium perfringens F262 RepID=H7CRX6_CLOPF
luxS; S-ribosylhomocysteinase
L2_021_000G1_scaffold_139_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26426..27334)
DNA (909bp) protein (303aa)
Cysteine synthase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CW24_CLOPF
cysteine synthase family protein
Cysteine synthase family protein {ECO:0000313|EMBL:ABG85476.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_021_000G1_scaffold_139_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27321..28475)
DNA (1155bp) protein (385aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:EDT15473.1}; EC=4.4.1.8 {ECO:0000313|EMBL:EDT15473.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Cystathionine beta-lyase n=2 Tax=Clostridium perfringens RepID=B1BS21_CLOPF
metB; cystathionine beta-lyase
L2_021_000G1_scaffold_139_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28539..29162)
DNA (624bp) protein (208aa)
Methyltransferase, UbiE/COQ5 family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFB6_CLOPF
Methyltransferase, UbiE/COQ5 family {ECO:0000313|EMBL:EDT27342.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
UbiE/COQ5 family methlytransferase
L2_021_000G1_scaffold_139_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29883..30350
DNA (468bp) protein (156aa)
Large-conductance mechanosensitive channel n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=MSCL_CLOPS
mscL; large-conductance mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000255|HAMAP-Rule:MF_00115}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_021_000G1_scaffold_139_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30489..33803)
DNA (3315bp) protein (1105aa)
Microbial collagenase {ECO:0000313|EMBL:EDT15459.1}; EC=3.4.24.3 {ECO:0000313|EMBL:EDT15459.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Microbial collagenase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS24_CLOPF
colA; collagenase
L2_021_000G1_scaffold_139_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34347..34802)
DNA (456bp) protein (152aa)
Arginine repressor n=2 Tax=Clostridium perfringens RepID=B1BS25_CLOPF
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
argR; arginine repressor ArgR
L2_021_000G1_scaffold_139_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34875..35819)
DNA (945bp) protein (315aa)
arcC; carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=5 Tax=Clostridium perfringens RepID=H7CRW9_CLOPF
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Displaying items 1-30 of 73 in total

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