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L2_021_000G1_scaffold_144

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_144_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..648
DNA (648bp) protein (216aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=5 Tax=Bacteroidales RepID=C7XBX0_9PORP
mechano-sensitive ion channel
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:KDS71828.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_021_000G1_scaffold_144_2
unknown

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673..801
DNA (129bp) protein (43aa)

This feature has no annotations

L2_021_000G1_scaffold_144_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

749..1357
DNA (609bp) protein (203aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LE65_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR43979.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_021_000G1_scaffold_144_4
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1466..2683)
DNA (1218bp) protein (406aa)
Aminopeptidase C n=6 Tax=Bacteroidales RepID=A6LE66_PARD8
aminopeptidase
Uncharacterized protein {ECO:0000313|EMBL:EKN30826.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L2_021_000G1_scaffold_144_5
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2838..3641
DNA (804bp) protein (268aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Pyrroline-5-carboxylate reductase n=5 Tax=Bacteroidales RepID=A6LE67_PARD8
pyrroline-5-carboxylate reductase
L2_021_000G1_scaffold_144_6
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3704..4954)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5ZDE6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30824.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
proline dehydrogenase
L2_021_000G1_scaffold_144_7
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4982..6613)
DNA (1632bp) protein (544aa)
1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRM7_9BACE
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:EFI08604.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
delta-1-pyrroline-5-carboxylate dehydrogenase
L2_021_000G1_scaffold_144_8
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6830..7018
DNA (189bp) protein (63aa)
Ferredoxin n=8 Tax=Bacteroidales RepID=C7XBW4_9PORP
Ferredoxin {ECO:0000313|EMBL:EEU50314.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
L2_021_000G1_scaffold_144_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7172..7825
DNA (654bp) protein (218aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LE70_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU50313.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_021_000G1_scaffold_144_10
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8524..9078
DNA (555bp) protein (185aa)
Transcriptional regulator n=9 Tax=Bacteroidales RepID=A6LE71_PARD8
transcriptional regulator
DNA-binding protein {ECO:0000313|EMBL:EFI08601.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L2_021_000G1_scaffold_144_11
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9091..10746
DNA (1656bp) protein (552aa)
Acetyl-coenzyme A synthetase n=4 Tax=Bacteroidales RepID=A6LE72_PARD8
Acetyl-CoA synthetase {ECO:0000313|EMBL:KEJ84249.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
acetyl-coenzyme A synthetase
L2_021_000G1_scaffold_144_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10762..11835
DNA (1074bp) protein (358aa)
gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Glutamate 5-kinase n=9 Tax=Bacteroidales RepID=A6LE73_PARD8
L2_021_000G1_scaffold_144_13
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11841..13088
DNA (1248bp) protein (416aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Gamma-glutamyl phosphate reductase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRM1_9BACE
proA; gamma-glutamyl phosphate reductase
L2_021_000G1_scaffold_144_14
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13139..14614
DNA (1476bp) protein (492aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
His Kinase A domain-containing protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRM0_9BACE
two-component system sensor histidine kinase
L2_021_000G1_scaffold_144_15
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14694..15656
DNA (963bp) protein (321aa)
N-acetylornithine carbamoyltransferase (AOTCase) n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRL9_9BACE
N-acetylornithine carbamoyltransferase (AOTCase) {ECO:0000313|EMBL:EFI08596.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
ornithine carbamoyltransferase
L2_021_000G1_scaffold_144_16
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15856..16170)
DNA (315bp) protein (105aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LE77_PARD8
transcriptional accessory protein
Uncharacterized protein {ECO:0000313|EMBL:EFK60665.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L2_021_000G1_scaffold_144_17
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16533..17417)
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=4 Tax=Bacteroidales RepID=C7XBV5_9PORP
transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEU50305.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_021_000G1_scaffold_144_18
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17433..18296)
DNA (864bp) protein (288aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRL6_9BACE
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EFI08593.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L2_021_000G1_scaffold_144_19
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18457..22752)
DNA (4296bp) protein (1432aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRL5_9BACE
L2_021_000G1_scaffold_144_20
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22829..26641)
DNA (3813bp) protein (1271aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=11 Tax=Bacteroidales RepID=RPOB_PARD8
L2_021_000G1_scaffold_144_21
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(26749..27126)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=8 Tax=Bacteroidales RepID=C7XBV1_9PORP
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
rplL; 50S ribosomal protein L7/L12
L2_021_000G1_scaffold_144_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(27177..27707)
DNA (531bp) protein (177aa)
Ribosomal protein L10 n=5 Tax=Bacteroidales RepID=A6LE83_PARD8
rplJ; 50S ribosomal protein L10
Ribosomal protein L10 {ECO:0000313|EMBL:ABR43997.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_021_000G1_scaffold_144_23
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(27722..28420)
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=8 Tax=Bacteroidales RepID=RL1_PARD8
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L2_021_000G1_scaffold_144_24
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(28436..28879)
DNA (444bp) protein (148aa)
50S ribosomal protein L11 n=5 Tax=Bacteroidales RepID=D0THH7_9BACE
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
rplK; 50S ribosomal protein L11
L2_021_000G1_scaffold_144_25
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28947..29489)
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=9 Tax=Bacteroidales RepID=A6LE86_PARD8
transcription anti-termination protein
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L2_021_000G1_scaffold_144_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29501..29695)
DNA (195bp) protein (65aa)
Protein translocase subunit SecE n=9 Tax=Bacteroidales RepID=A6LE87_PARD8
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L2_021_000G1_scaffold_144_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29839..31026)
DNA (1188bp) protein (396aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=8 Tax=Bacteroidales RepID=EFTU_PARD8
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_021_000G1_scaffold_144_28
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31201..31359)
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9QN01_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB36905.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L2_021_000G1_scaffold_144_29
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31543..31878)
DNA (336bp) protein (112aa)
Sigma-54 modulation protein n=9 Tax=Bacteroidales RepID=A6LE89_PARD8
Ribosomal subunit interface protein {ECO:0000313|EMBL:EEY82585.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
sigma-54 modulation protein
L2_021_000G1_scaffold_144_30
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31832..32740)
DNA (909bp) protein (303aa)
Tyrosine recombinase XerC n=2 Tax=Bacteroides RepID=D0THI2_9BACE
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
tyrosine type site-specific recombinase
Displaying items 1-30 of 64 in total

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