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L2_021_000G1_scaffold_146

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_146_1
Reticulomyxa filosa, Reticulomyxa, Eukaryota

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3..254
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Eimeria praecox RepID=U6G5N5_9EIME
Uncharacterized protein {ECO:0000313|EMBL:ETO29147.1}; Flags: Fragment;; TaxID=46433 species="Eukaryota; Rhizaria; Foraminifera; Monothalamids; Reticulomyxidae; Reticulomyxa.;" source="Reticulomyxa filosa.;"
Cell surface protein
L2_021_000G1_scaffold_146_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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308..1246
DNA (939bp) protein (313aa)
glucokinase (EC:2.7.1.2)
Glucokinase {ECO:0000313|EMBL:CBL14326.1}; EC=2.7.1.2 {ECO:0000313|EMBL:CBL14326.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Glucokinase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L3Y6_9FIRM
L2_021_000G1_scaffold_146_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1324..2007)
DNA (684bp) protein (228aa)
Probable proton-coupled thiamine transporter YuaJ n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L3Y7_9FIRM
probable proton-coupled thiamine transporter YuaJ
Probable proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:CBL14327.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_021_000G1_scaffold_146_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2750..3835
DNA (1086bp) protein (362aa)
Periplasmic binding protein n=2 Tax=Roseburia RepID=C7G9V8_9FIRM
Putative iron compound ABC transporter iron-binding protein {ECO:0000313|EMBL:CDA57679.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L2_021_000G1_scaffold_146_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3854..5224
DNA (1371bp) protein (457aa)
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:EEV01392.1}; EC=2.1.1.107 {ECO:0000313|EMBL:EEV01392.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
uroporphyrin-III C-methyltransferase (EC:1.3.1.76 2.1.1.107 4.99.1.4)
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9V9_9FIRM
L2_021_000G1_scaffold_146_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5588..6073
DNA (486bp) protein (162aa)
Nucleotidyltransferase substrate-binding family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9W0_9FIRM
Nucleotidyltransferase substrate-binding family protein {ECO:0000313|EMBL:EEV01393.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_021_000G1_scaffold_146_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5957..6337)
DNA (381bp) protein (127aa)
glutathione peroxidase (EC:1.11.1.9)
Glutathione peroxidase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B9V4_9FIRM
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_146_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6458..7288)
DNA (831bp) protein (277aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
Iron(III) dicitrate ABC transporter, ATP-binding protein FecE n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9W2_9FIRM
Iron(III) dicitrate ABC transporter, ATP-binding protein FecE {ECO:0000313|EMBL:EEV01395.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_021_000G1_scaffold_146_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7281..8279)
DNA (999bp) protein (333aa)
ABC-type Fe3+-siderophore transport system, permease component n=2 Tax=Roseburia intestinalis RepID=D4KKT8_9FIRM
ABC-type Fe3+-siderophore transport system, permease component
ABC-type Fe3+-siderophore transport system, permease component {ECO:0000313|EMBL:CBL07490.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_146_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8695..8931
DNA (237bp) protein (79aa)
Predicted transcriptional regulators n=3 Tax=Roseburia RepID=D4L3Z3_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CDA57689.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_146_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8995..9402
DNA (408bp) protein (136aa)
Uncharacterized conserved protein n=2 Tax=Roseburia RepID=D4L3Z4_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CDA57691.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_146_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10321..10956)
DNA (636bp) protein (212aa)
Uncharacterized conserved protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKU1_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL07493.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_146_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10963..12174)
DNA (1212bp) protein (404aa)
Major Facilitator Superfamily n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L3Z7_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEV01402.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Major Facilitator Superfamily.
L2_021_000G1_scaffold_146_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12290..13186
DNA (897bp) protein (299aa)
Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKU3_9FIRM
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CBL07495.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_146_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13812..15044
DNA (1233bp) protein (411aa)
O-acetylhomoserine sulfhydrylase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrylase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B6Z6_9FIRM
O-acetylhomoserine sulfhydrylase {ECO:0000313|EMBL:CDA56704.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_146_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15170..16036
DNA (867bp) protein (289aa)
Dissimilatory sulfite reductase (Desulfoviridin), alpha and beta subunits n=2 Tax=Roseburia intestinalis RepID=D4KKU8_9FIRM
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEV02910.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_021_000G1_scaffold_146_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16231..16482
DNA (252bp) protein (84aa)
Predicted redox protein, regulator of disulfide bond formation n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKU9_9FIRM
Predicted redox protein, regulator of disulfide bond formation
Predicted redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:CBL07501.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_146_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16491..16811
DNA (321bp) protein (107aa)
Thioredoxin n=3 Tax=Roseburia RepID=D4KKV0_9FIRM
Thioredoxin domain-containing protein
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_146_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16852..17073
DNA (222bp) protein (74aa)
Thiamine biosynthesis protein ThiS n=2 Tax=Roseburia intestinalis RepID=D4KKV1_9FIRM
thiamine biosynthesis protein ThiS
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EEV02907.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_021_000G1_scaffold_146_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17057..17866
DNA (810bp) protein (270aa)
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 n=4 Tax=Roseburia RepID=D4KKV2_9FIRM
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 {ECO:0000313|EMBL:CBL14347.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_021_000G1_scaffold_146_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17881..18294
DNA (414bp) protein (138aa)
Predicted metal-dependent protease of the PAD1/JAB1 superfamily n=3 Tax=Roseburia RepID=D4L408_9FIRM
Predicted metal-dependent protease of the PAD1/JAB1 superfamily
Predicted metal-dependent protease of the PAD1/JAB1 superfamily {ECO:0000313|EMBL:CBL14348.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_021_000G1_scaffold_146_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18482..21196
DNA (2715bp) protein (905aa)
Bacterial Ig-like domain (Group 2)./Fibronectin type III domain n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AXU4_9FIRM
Bacterial Ig-like domain (Group 2)./Fibronectin type III domain {ECO:0000313|EMBL:CDA56693.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Bacterial Ig-like domain (group 2)./Fibronectin type III domain.
L2_021_000G1_scaffold_146_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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21237..24002
DNA (2766bp) protein (922aa)
Bacterial Ig-like domain (Group 2)./Fibronectin type III domain n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BTU8_9FIRM
Bacterial Ig-like domain (Group 2)./Fibronectin type III domain {ECO:0000313|EMBL:CDA56692.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Ig-like domain-containing surface protein
L2_021_000G1_scaffold_146_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24330..24560
DNA (231bp) protein (77aa)
Acyl carrier protein n=3 Tax=Roseburia RepID=D4L411_9FIRM
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_146_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24563..25486
DNA (924bp) protein (308aa)
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Putative enoyl-(Acyl-carrier-protein) reductase II {ECO:0000313|EMBL:CBL07509.1}; EC=1.3.1.- {ECO:0000313|EMBL:CBL07509.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Putative enoyl-(Acyl-carrier-protein) reductase II n=2 Tax=Roseburia intestinalis RepID=D4KKV7_9FIRM
L2_021_000G1_scaffold_146_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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25476..26444
DNA (969bp) protein (323aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B6Y3_9FIRM
L2_021_000G1_scaffold_146_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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26505..27245
DNA (741bp) protein (247aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:CBL14354.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CBL14354.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L414_9FIRM
L2_021_000G1_scaffold_146_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27334..28569
DNA (1236bp) protein (412aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BTU3_9FIRM
L2_021_000G1_scaffold_146_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28633..29061
DNA (429bp) protein (143aa)
beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=2 Tax=Roseburia RepID=D4KKW0_9FIRM
L2_021_000G1_scaffold_146_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29127..30875
DNA (1749bp) protein (583aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|SAAS:SAAS00057375}; EC=6.4.1.- {ECO:0000256|SAAS:SAAS00275530};; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-CoA carboxylase, carboxyl transferase, beta subunit n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5K7_9FIRM
Displaying items 1-30 of 76 in total

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