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L2_021_000G1_scaffold_155

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_155_1
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..648)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P060_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ03041.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L2_021_000G1_scaffold_155_2
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(662..1291)
DNA (630bp) protein (210aa)
Phage shock protein A n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NEY9_9FIRM
Phage shock protein A {ECO:0000313|EMBL:CDF11146.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
phage shock protein A, PspA
L2_021_000G1_scaffold_155_3
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1445..3508)
DNA (2064bp) protein (688aa)
ABC transporter, ATP binding-protein n=3 Tax=Clostridium acetobutylicum RepID=F0KDS6_CLOAE
bceA; ABC transporter ATP-binding protein
ABC transporter, ATP binding-protein {ECO:0000313|EMBL:AAK78147.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
L2_021_000G1_scaffold_155_4
unknown

Not on your lists

3640..3963
DNA (324bp) protein (108aa)

This feature has no annotations

L2_021_000G1_scaffold_155_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4084..4668
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99012.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
lemA protein
L2_021_000G1_scaffold_155_6
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4671..5453
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LUN6_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR34066.1}; Flags: Precursor;; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_021_000G1_scaffold_155_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5500..6888)
DNA (1389bp) protein (463aa)
methyl-accepting chemotaxis protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000287C0D0
Uncharacterized protein {ECO:0000313|EMBL:KJU72450.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
methyl-accepting chemotaxis (MCP) signaling domain protein
L2_021_000G1_scaffold_155_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6995..7312)
DNA (318bp) protein (106aa)
Uncharacterized protein n=4 Tax=Clostridium botulinum RepID=B2TPQ4_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL07835.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_021_000G1_scaffold_155_9
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7319..7870)
DNA (552bp) protein (184aa)
rbr3B; Reverse rubrerythrin-2 (EC:1.11.1.1)
Reverse rubrerythrin-2 {ECO:0000313|EMBL:CDM70180.1}; EC=1.11.1.1 {ECO:0000313|EMBL:CDM70180.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Rbr3B: reverse rubrerythrin-2 n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MNK5_9CLOT
L2_021_000G1_scaffold_155_10
unknown

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comp(8002..8220)
DNA (219bp) protein (73aa)

This feature has no annotations

L2_021_000G1_scaffold_155_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8338..9318
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V4I9_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL09493.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_021_000G1_scaffold_155_12
unknown

Not on your lists

comp(9342..9863)
DNA (522bp) protein (174aa)

This feature has no annotations

L2_021_000G1_scaffold_155_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9978..10364)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVT6_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43552.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_155_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10551..10895
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98071.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
macrophage migration inhibitory factor family protein
L2_021_000G1_scaffold_155_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10944..12428)
DNA (1485bp) protein (495aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Glycerol kinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDD9_9CLOT
glycerol kinase
L2_021_000G1_scaffold_155_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12534..13964)
DNA (1431bp) protein (477aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Adenylosuccinate lyase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SSF2_CLOPS
L2_021_000G1_scaffold_155_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14138..14356
DNA (219bp) protein (73aa)
Putative membrane protein n=2 Tax=Clostridium botulinum E RepID=B2V4I7_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71399.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_021_000G1_scaffold_155_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14391..14651)
DNA (261bp) protein (87aa)
HPr family phosphocarrier n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPN2_CLOSA
ptsH; phosphocarrier protein HPr
HPr family phosphocarrier {ECO:0000313|EMBL:AGX42458.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_155_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14779..15039)
DNA (261bp) protein (87aa)
Stage V sporulation protein S n=2 Tax=Clostridium RepID=R9CDY0_9CLOT
Putative Stage V sporulation protein S {ECO:0000313|EMBL:CDG01644.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
spoVS; stage V sporulation protein S
L2_021_000G1_scaffold_155_20
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15217..16758)
DNA (1542bp) protein (514aa)
rny; ribonuclease Y (EC:3.1.-.-)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Ribonuclease Y n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS45_CLOSA
L2_021_000G1_scaffold_155_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17102..18136)
DNA (1035bp) protein (345aa)
Protein recA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H316_9CLOT
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
recA; recombinase A
L2_021_000G1_scaffold_155_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18418..19008)
DNA (591bp) protein (197aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EES50868.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EES50868.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Clostridium botulinum E RepID=B2V4I2_CLOBA
L2_021_000G1_scaffold_155_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18992..20329)
DNA (1338bp) protein (446aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Ribosomal protein S12 methylthiotransferase RimO n=3 Tax=Clostridium butyricum RepID=B1QUW4_CLOBU
rimO; ribosomal protein S12 methylthiotransferase RimO
L2_021_000G1_scaffold_155_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20408..22780)
DNA (2373bp) protein (791aa)
cell division protein FtsK n=1 Tax=Clostridium beijerinckii RepID=UPI0002ED1E22
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:AIY82298.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
ftsK/SpoIIIE family protein
L2_021_000G1_scaffold_155_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22861..23586)
DNA (726bp) protein (242aa)
Clp protease n=3 Tax=Clostridium butyricum RepID=B1QUW6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84572.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
peptidase S14, ClpP
L2_021_000G1_scaffold_155_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23658..24854)
DNA (1197bp) protein (399aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
dapG; aspartokinase 1 (EC:2.7.2.4)
Aspartokinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHP2_CLOBU
L2_021_000G1_scaffold_155_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24872..25153)
DNA (282bp) protein (94aa)
Sporulation protein, YlmC/YmxH family n=2 Tax=Clostridium botulinum E RepID=B2V4H7_CLOBA
PRC-barrel domain-containing protein
Photosystem reaction center subunit H {ECO:0000313|EMBL:KIL09481.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_021_000G1_scaffold_155_28
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25211..26518)
DNA (1308bp) protein (436aa)
Zinc protease n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G6U7_CLOPA
Zinc protease {ECO:0000313|EMBL:ETD71402.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
peptidase M16 domain-containing protein
L2_021_000G1_scaffold_155_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26642..28753)
DNA (2112bp) protein (704aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000255|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000255|HAMAP-Rule:MF_01595}; Short=PNPase {ECO:0000255|HAMAP-Rule:MF_01595};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=2 Tax=Clostridium botulinum B RepID=PNP_CLOBB
L2_021_000G1_scaffold_155_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(28838..29101)
DNA (264bp) protein (88aa)
30S ribosomal protein S15 n=2 Tax=Clostridium botulinum B RepID=RS15_CLOBB
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
Displaying items 1-30 of 81 in total

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