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L2_021_000G1_scaffold_192

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_192_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11..1003)
DNA (993bp) protein (331aa)
UDP-N-acetylglucosamine 4,6-dehydratase {ECO:0000313|EMBL:EEP55448.1}; EC=4.2.1.- {ECO:0000313|EMBL:EEP55448.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
pseB; UDP-N-acetylglucosamine 4,6-dehydratase PseD (EC:4.2.1.115)
Polysaccharide biosynthesis protein n=2 Tax=Clostridium butyricum RepID=B1QX85_CLOBU
L2_021_000G1_scaffold_192_2
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1046..1393)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1B3_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR36393.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_021_000G1_scaffold_192_3
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1415..3157)
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1B4_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR36394.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_021_000G1_scaffold_192_4
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3185..4879)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1B4_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR36394.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_021_000G1_scaffold_192_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4979..5791)
DNA (813bp) protein (271aa)
Flagellin n=2 Tax=Clostridium butyricum RepID=B1QX96_CLOBU
Flagellin {ECO:0000313|EMBL:KHD15811.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
flagellin domain-containing protein
L2_021_000G1_scaffold_192_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5963..6292)
DNA (330bp) protein (110aa)
DNA double-strand break repair Rad50 ATPase n=2 Tax=Clostridium butyricum RepID=B1QX97_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55519.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_021_000G1_scaffold_192_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6313..7836)
DNA (1524bp) protein (508aa)
Putative flagellar hook-associated protein 2 n=1 Tax=Clostridium butyricum 5521 RepID=B1QX98_CLOBU
Flagellar hook protein {ECO:0000313|EMBL:KHD15813.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
fliD; flagellar hook-associated protein 2
L2_021_000G1_scaffold_192_8
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7862..8239)
DNA (378bp) protein (126aa)
Flagellar assembly protein FliS n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N4G3_9CLOT
fliS; flagellar assembly protein FliS
Flagellar assembly protein FliS {ECO:0000313|EMBL:AGF58327.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_021_000G1_scaffold_192_9
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8252..8545)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9X1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHJ01510.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_021_000G1_scaffold_192_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8572..8979)
DNA (408bp) protein (136aa)
Flagellar protein FlaG n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUQ8_9CLOT
Flagellar protein FlaG {ECO:0000313|EMBL:EKQ51141.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
flagellar protein FlaG protein
L2_021_000G1_scaffold_192_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9013..9231)
DNA (219bp) protein (73aa)
Carbon storage regulator homolog n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TW07_9CLOT
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
carbon storage regulator, CsrA
L2_021_000G1_scaffold_192_12
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9236..9661)
DNA (426bp) protein (142aa)
Flagellar assembly factor FliW n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SXY6_9CLOT
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
flagellar assembly protein FliW
L2_021_000G1_scaffold_192_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9677..10714)
DNA (1038bp) protein (346aa)
Flagellar hook-associated protein 3 n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1C7_CLOB8
flagellar hook-associated protein 3
Flagellar hook-associated protein 3 {ECO:0000313|EMBL:ABR36407.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_021_000G1_scaffold_192_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10734..12548)
DNA (1815bp) protein (605aa)
Flagellar hook-associated protein FlgK n=2 Tax=Clostridium butyricum RepID=B1QXA5_CLOBU
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:EEP55406.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
flagellar hook-associated protein FlgK
L2_021_000G1_scaffold_192_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12792..13202)
DNA (411bp) protein (137aa)
FlgN family protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWN9_CLOSA
FlgN family protein
FlgN family protein {ECO:0000313|EMBL:AGX44933.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_192_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13208..13477)
DNA (270bp) protein (90aa)
Anti-sigma-28 factor, FlgM n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW02_CLOSA
anti-sigma-28 factor, FlgM
Anti-sigma-28 factor, FlgM {ECO:0000313|EMBL:AGX44934.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_192_17
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13599..14771)
DNA (1173bp) protein (391aa)
CheC, inhibitor of MCP methylation n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1D2_CLOB8
flagellar motor switch protein
CheC, inhibitor of MCP methylation {ECO:0000313|EMBL:ABR36412.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_021_000G1_scaffold_192_18
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14755..15756)
DNA (1002bp) protein (334aa)
Flagellar motor switch protein FliM n=2 Tax=Clostridium butyricum RepID=M8J719_CLOBU
Flagellar motor switch protein FliM {ECO:0000313|EMBL:KJZ82792.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
fliM; flagellar motor switch protein FliM
L2_021_000G1_scaffold_192_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15778..16179)
DNA (402bp) protein (134aa)
Chemotaxis signal transduction protein CheW n=3 Tax=Clostridium butyricum RepID=M8KAT8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31490.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
chemotaxis signal transduction protein
L2_021_000G1_scaffold_192_20
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16228..16587)
DNA (360bp) protein (120aa)
Response regulator (CheY-like and AraC-type DNA-binding domain containing protein) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUR7_9CLOT
Response regulator (CheY-like and AraC-type DNA-binding domain containing protein) {ECO:0000313|EMBL:EKQ51151.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
cheY3; chemotaxis protein CheY
L2_021_000G1_scaffold_192_21
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16609..17208)
DNA (600bp) protein (200aa)
CheC, inhibitor of MCP methylation n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9Y3_9CLOT
CheC, inhibitor of MCP methylation {ECO:0000313|EMBL:EHJ01522.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
chemotaxis protein CheC
L2_021_000G1_scaffold_192_22
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17248..19266)
DNA (2019bp) protein (673aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
cheA2; chemotaxis protein CheA (EC:2.7.13.3)
Chemotaxis protein CheA n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N4H6_9CLOT
L2_021_000G1_scaffold_192_23
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19281..20048)
DNA (768bp) protein (256aa)
cheR1; chemotaxis protein methyltransferase CheR (EC:2.1.1.80)
Methylase of chemotaxis methyl-accepting protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U7B8_9CLOT
Methylase of chemotaxis methyl-accepting protein {ECO:0000313|EMBL:EKQ51154.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_021_000G1_scaffold_192_24
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20059..21126)
DNA (1068bp) protein (356aa)
cheB3; chemotaxis response regulator protein-glutamate methylesterase CheB (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZL7_CLOSA
L2_021_000G1_scaffold_192_25
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21141..21629)
DNA (489bp) protein (163aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9Y7_9CLOT
chemoreceptor glutamine deamidase CheD
L2_021_000G1_scaffold_192_26
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21639..22088)
DNA (450bp) protein (150aa)
CheW protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9Y8_9CLOT
CheW protein {ECO:0000313|EMBL:EHJ01527.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
CheW protein
L2_021_000G1_scaffold_192_27
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22099..24096)
DNA (1998bp) protein (666aa)
Putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SXZ7_9CLOT
Putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon {ECO:0000313|EMBL:EKQ51158.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon
L2_021_000G1_scaffold_192_28
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24222..24989)
DNA (768bp) protein (256aa)
Aminotransferase class IV n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZ76_CLOSA
aminotransferase class IV
Aminotransferase class IV {ECO:0000313|EMBL:AGX44946.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_192_29
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24980..25630)
DNA (651bp) protein (217aa)
HAD family hydrolase n=1 Tax=Clostridium beijerinckii RepID=UPI0002FE1404
HAD family hydrolase
HAD family hydrolase {ECO:0000313|EMBL:ETD71213.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_021_000G1_scaffold_192_30
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25784..26977)
DNA (1194bp) protein (398aa)
Aspartate aminotransferase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G3V9_CLOPA
Aspartate aminotransferase {ECO:0000313|EMBL:ETD71214.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
class I and II aminotransferase
Displaying items 1-30 of 125 in total

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