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L2_021_000G1_scaffold_280

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_280_1
unknown

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1..240
DNA (240bp) protein (80aa)

This feature has no annotations

L2_021_000G1_scaffold_280_2
unknown

Not on your lists

307..486
DNA (180bp) protein (60aa)

This feature has no annotations

L2_021_000G1_scaffold_280_3

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comp(610..873)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1S9B6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC54028.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
GntR-like transcriptional regulator
L2_021_000G1_scaffold_280_4
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(860..2833)
DNA (1974bp) protein (658aa)
Type IV secretory pathway, VirD4 components n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L9I1_9FIRM
Type IV secretory pathway, VirD4 components
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:CBL16276.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_021_000G1_scaffold_280_5

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comp(2812..3729)
DNA (918bp) protein (306aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1U5H3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC75279.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_021_000G1_scaffold_280_6
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3787..5997)
DNA (2211bp) protein (737aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KNY2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY66799.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
Sel1 repeat.
L2_021_000G1_scaffold_280_7

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comp(6001..6408)
DNA (408bp) protein (136aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TGQ2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC65515.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_021_000G1_scaffold_280_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6747..7424)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSZ2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96211.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_021_000G1_scaffold_280_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7411..7686)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSZ1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96210.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_021_000G1_scaffold_280_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7700..8077)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSY9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96208.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_021_000G1_scaffold_280_11
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8226..9296)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4B9_9FIRM
Uncharacterised protein {ECO:0000313|EMBL:CEO22754.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L2_021_000G1_scaffold_280_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9431..10462)
DNA (1032bp) protein (344aa)
NlpC/P60 family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSY7_9FIRM
NlpC/P60 family.
NlpC/P60 family {ECO:0000313|EMBL:CBK96206.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_021_000G1_scaffold_280_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10459..12291)
DNA (1833bp) protein (611aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBK96205.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Domain of unknown function DUF87.
L2_021_000G1_scaffold_280_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12313..12984)
DNA (672bp) protein (224aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSY5_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK96204.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_021_000G1_scaffold_280_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12968..13561)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSY4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96203.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_021_000G1_scaffold_280_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13567..13827)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSY3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96202.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_021_000G1_scaffold_280_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13824..14549)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSY2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96201.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_021_000G1_scaffold_280_18
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14561..15439)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ELY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE03273.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L2_021_000G1_scaffold_280_19
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15529..15870)
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=root RepID=R7EKX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE03275.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L2_021_000G1_scaffold_280_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15867..16205)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSY0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96199.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_021_000G1_scaffold_280_21
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16205..20617)
DNA (4413bp) protein (1471aa)
Cna protein B-type domain n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EK73_9FIRM
Cna protein B-type domain {ECO:0000313|EMBL:CDE03279.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
Cna protein B-type domain.
L2_021_000G1_scaffold_280_22
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20701..21543)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ELI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE03281.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L2_021_000G1_scaffold_280_23

Not on your lists

comp(21618..21986)
DNA (369bp) protein (123aa)
SpoVG family protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SYM7_9ZZZZ
SpoVG family protein {ECO:0000313|EMBL:EKC60454.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
SpoVG family protein
L2_021_000G1_scaffold_280_24

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comp(22002..22307)
DNA (306bp) protein (102aa)
Protein containing SpoVT/AbrB-like, predicted transcription regulator domain protein n=1 Tax=human gut metagenome RepID=K1SS86_9ZZZZ
Protein containing SpoVT/AbrB-like, predicted transcription regulator domain protein {ECO:0000313|EMBL:EKC60453.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_021_000G1_scaffold_280_25
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22309..22569)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EK80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE03289.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L2_021_000G1_scaffold_280_26
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22551..23534)
DNA (984bp) protein (328aa)
Site-specific DNA methylase (EC:2.1.1.72)
Site-specific DNA methylase n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ELI9_9FIRM
Site-specific DNA methylase {ECO:0000313|EMBL:CDE03291.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L2_021_000G1_scaffold_280_27
unknown

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comp(23890..24798)
DNA (909bp) protein (303aa)

This feature has no annotations

L2_021_000G1_scaffold_280_28
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25020..26582)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EK95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE03309.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L2_021_000G1_scaffold_280_29

Not on your lists

comp(26589..27860)
DNA (1272bp) protein (424aa)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=human gut metagenome RepID=K1T1R8_9ZZZZ
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EKC61584.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Putative DNA (cytosine-5-)-methyltransferase
L2_021_000G1_scaffold_280_30
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27909..28382)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EPA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE03312.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
Displaying items 1-30 of 54 in total

View Taxonomy