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L2_021_000G1_scaffold_287

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_287_1
Clostridium paraputrificum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..207)
DNA (207bp) protein (69aa)
Chitinase A n=1 Tax=Clostridium paraputrificum RepID=Q9ZNL0_9CLOT
Chitinase A {ECO:0000313|EMBL:BAA34922.1}; TaxID=29363 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium paraputrificum.;"
glycosyl hydrolases 18 family protein
L2_021_000G1_scaffold_287_2
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(387..3029)
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
valS; valine--tRNA ligase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y170_9CLOT
L2_021_000G1_scaffold_287_3
Planomicrobium sp. ES2, Planomicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3352..3861)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Bacillus sp. 10403023 RepID=UPI000289BCCB
Uncharacterized protein {ECO:0000313|EMBL:CEG22819.1}; TaxID=1499687 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planomicrobium.;" source="Planomicrobium sp. ES2.;"
hypothetical protein
L2_021_000G1_scaffold_287_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3967..4212)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFM7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98663.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L2_021_000G1_scaffold_287_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4245..4370)
DNA (126bp) protein (42aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=B1BV94_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26785.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_000G1_scaffold_287_6
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4433..5701)
DNA (1269bp) protein (423aa)
Oxidoreductase n=1 Tax=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) RepID=Q8ETK8_OCEIH
Glycosyl hydrolase family protein {ECO:0000313|EMBL:CEG25455.1}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
oxidoreductase
L2_021_000G1_scaffold_287_7
unknown

Not on your lists

comp(5714..6265)
DNA (552bp) protein (184aa)

This feature has no annotations

L2_021_000G1_scaffold_287_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6336..7568)
DNA (1233bp) protein (411aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000255|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000255|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000255|HAMAP-Rule:MF_00051};; TaxID=508767 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Alaska E43 / Type E3).;"
serine hydroxymethyltransferase n=1 Tax=Clostridium botulinum RepID=UPI00037F47A0
L2_021_000G1_scaffold_287_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7698..8465
DNA (768bp) protein (256aa)
Membrane spanning protein n=2 Tax=Clostridium botulinum B RepID=B2TN40_CLOBB
membrane spanning protein
Membrane spanning protein {ECO:0000313|EMBL:ACD23460.1}; Putative membrane protein {ECO:0000313|EMBL:CDH89993.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_021_000G1_scaffold_287_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8465..8926
DNA (462bp) protein (154aa)
Membrane spanning protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UYQ0_CLOBO
membrane spanning protein
Membrane spanning protein {ECO:0000313|EMBL:EES49675.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L2_021_000G1_scaffold_287_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9160..10035
DNA (876bp) protein (292aa)
Cation efflux family protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IGK0_CLOBU
Cation efflux family protein {ECO:0000313|EMBL:EEP54023.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
cation efflux protein
L2_021_000G1_scaffold_287_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10035..10520
DNA (486bp) protein (162aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LTM2_CLOB8
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AJG98344.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L2_021_000G1_scaffold_287_13
unknown

Not on your lists

comp(10568..10969)
DNA (402bp) protein (134aa)

This feature has no annotations

L2_021_000G1_scaffold_287_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11053..11451
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28303.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L2_021_000G1_scaffold_287_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11531..12484)
DNA (954bp) protein (318aa)
K+-dependent Na+/Ca+ exchanger protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UYP8_CLOBO
K+-dependent Na+/Ca+ exchanger protein {ECO:0000313|EMBL:EES50437.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
putative K+-dependent Na+/Ca+ exchanger-like protein
L2_021_000G1_scaffold_287_16
unknown

Not on your lists

comp(12528..12875)
DNA (348bp) protein (116aa)

This feature has no annotations

L2_021_000G1_scaffold_287_17
unknown

Not on your lists

comp(12932..13600)
DNA (669bp) protein (223aa)

This feature has no annotations

L2_021_000G1_scaffold_287_18
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13847..14119)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FAF0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG02018.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L2_021_000G1_scaffold_287_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14202..15581)
DNA (1380bp) protein (460aa)
Radical SAM domain-containing protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MM21_CLOSA
radical SAM domain-containing protein
Radical SAM domain-containing protein {ECO:0000313|EMBL:AGX41568.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_287_20
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15781..16974)
DNA (1194bp) protein (398aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
LL-diaminopimelate aminotransferase (EC:2.6.1.83)
LL-diaminopimelate aminotransferase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAG2_9CLOT
L2_021_000G1_scaffold_287_21
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16958..18574)
DNA (1617bp) protein (539aa)
CTP synthase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
CTP synthase n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UGF0_RUMA7
L2_021_000G1_scaffold_287_22
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18567..19406)
DNA (840bp) protein (280aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MN77_9FIRM
L2_021_000G1_scaffold_287_23
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19412..19981)
DNA (570bp) protein (190aa)
UPI0003D68577 related cluster n=1 Tax=unknown RepID=UPI0003D68577
ANTAR domain protein {ECO:0000313|EMBL:CDA11246.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ANTAR domain-containing protein
L2_021_000G1_scaffold_287_24
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20010..21332)
DNA (1323bp) protein (441aa)
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase, type I n=7 Tax=Clostridium thermocellum RepID=A3DBW4_CLOTH
Glutamine synthetase type I {ECO:0000313|EMBL:GAE87020.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
L2_021_000G1_scaffold_287_25
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21572..22579
DNA (1008bp) protein (336aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
asnA2; aspartate--ammonia ligase AsnA (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAH1_9CLOT
L2_021_000G1_scaffold_287_26
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22593..24689
DNA (2097bp) protein (699aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EEG31517.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EEG31517.1};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Glutamate--ammonia ligase, catalytic domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAH2_9CLOT
glutamine synthetase
L2_021_000G1_scaffold_287_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24730..25638)
DNA (909bp) protein (303aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
rnz; ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UYR3_CLOBO
L2_021_000G1_scaffold_287_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25690..26502)
DNA (813bp) protein (271aa)
Putative membrane protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5USR9_CLOBO
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EES50959.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L2_021_000G1_scaffold_287_29
Vibrio anguillarum, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26697..26906)
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Listonella anguillarum serovar O1 RepID=F7YQL1_VIBA7
putative uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:AEH34198.1}; TaxID=882102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio anguillarum (strain ATCC 68554 / 775) (Listonella anguillarum).;"
L2_021_000G1_scaffold_287_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27533..28561
DNA (1029bp) protein (343aa)
Chitinase n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SHT6_9BACL
Chitinase {ECO:0000313|EMBL:KJU72611.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
glycosyl hydrolases 18 family protein
Displaying items 1-30 of 56 in total

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