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L2_021_000G1_scaffold_321

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_321_1
unknown

Not on your lists

378..515
DNA (138bp) protein (46aa)

This feature has no annotations

L2_021_000G1_scaffold_321_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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553..990
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXN6_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45313.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_321_3
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1011..1451
DNA (441bp) protein (147aa)
VanZ family protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M325_CLOB8
VanZ family protein
VanZ family protein {ECO:0000313|EMBL:ABR37005.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_021_000G1_scaffold_321_4
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1621..3153
DNA (1533bp) protein (511aa)
P-aminobenzoyl-glutamate transporter (AbgT) family, permease protein n=3 Tax=Clostridium butyricum RepID=B1R0B4_CLOBU
Aminobenzoyl-glutamate transport protein {ECO:0000313|EMBL:KJZ85234.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
aminobenzoyl-glutamate transport protein
L2_021_000G1_scaffold_321_5
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3243..4745)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXJ5_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45310.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_321_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5110..7194
DNA (2085bp) protein (695aa)
Translation elongation factor G n=1 Tax=Clostridium butyricum DKU-01 PF0_CLOBU">RepID=M8JPF0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85232.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
fusA2; elongation factor G
L2_021_000G1_scaffold_321_7
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7349..7585
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M322_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR37002.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_021_000G1_scaffold_321_8
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7717..8670
DNA (954bp) protein (318aa)
glcK4; glucokinase GlcK (EC:2.7.1.2)
Glucokinase GlcK {ECO:0000313|EMBL:AGF59299.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AGF59299.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Glucokinase GlcK n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MN52_9CLOT
L2_021_000G1_scaffold_321_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9115..10350
DNA (1236bp) protein (412aa)
Putative competence-damage inducible protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U640_9CLOT
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
competence damage-inducible protein A
L2_021_000G1_scaffold_321_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10746..11219)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXM7_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45303.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_321_11
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11341..12078)
DNA (738bp) protein (246aa)
cobB3; NAD-dependent protein deacetylase (EC:3.5.1.-)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968, ECO:0000313|EMBL:CDM69391.1}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968, ECO:0000313|EMBL:CDM69391.1};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NAD-dependent protein deacetylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHV3_CLOBU
L2_021_000G1_scaffold_321_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12184..12396
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFF4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR28008.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
putative membrane protein
L2_021_000G1_scaffold_321_13
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12478..13449
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JN75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64278.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
putative dehydrogenase
L2_021_000G1_scaffold_321_14

Not on your lists

comp(14106..14513)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8KHV8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ16633.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_021_000G1_scaffold_321_15
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14539..15216)
DNA (678bp) protein (226aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
ung; uracil-DNA glycosylase Ung (EC:3.2.2.27)
Uracil-DNA glycosylase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAR5_9CLOT
L2_021_000G1_scaffold_321_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15376..16122
DNA (747bp) protein (249aa)
prsA2; foldase protein PrsA (EC:5.2.1.8)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Foldase protein PrsA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXM3_CLOSA
L2_021_000G1_scaffold_321_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16203..16856)
DNA (654bp) protein (218aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDX8_CLOBU
HAD family hydrolase {ECO:0000313|EMBL:KHD15457.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L2_021_000G1_scaffold_321_18
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17255..18553
DNA (1299bp) protein (433aa)
Cell wall-associated hydrolase, invasion-associated protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUF3_9CLOT
Cell wall-associated hydrolase, invasion-associated protein {ECO:0000313|EMBL:EKQ50442.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
protein P54
L2_021_000G1_scaffold_321_19
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18731..19483
DNA (753bp) protein (251aa)
Methyltransferase small n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAR1_9CLOT
Methyltransferase small {ECO:0000313|EMBL:EHJ02320.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
small; methyltransferase Small
L2_021_000G1_scaffold_321_20
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19486..20331
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
rsmI; ribosomal RNA small subunit methyltransferase I (EC:2.1.1.198)
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TH53_9CLOT
L2_021_000G1_scaffold_321_21
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20403..20648)
DNA (246bp) protein (82aa)
Transcriptional regulator, AbrB family n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N0H5_CLOSA
transcriptional regulator, AbrB family
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:AGX45292.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_321_22
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21217..21807
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 5521 RepID=B1QWM9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94675.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_021_000G1_scaffold_321_23
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21971..24256
DNA (2286bp) protein (762aa)
Rad3-like DNA helicase {ECO:0000313|EMBL:AGF59285.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AGF59285.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Rad3-like DNA helicase (EC:3.6.4.12)
Rad3-like DNA helicase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M151_9CLOT
L2_021_000G1_scaffold_321_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24432..25616
DNA (1185bp) protein (395aa)
Putative pleiotropic regulatory protein DegT n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9M4_CLOBU
Putative pleiotropic regulatory protein DegT {ECO:0000313|EMBL:EEP55871.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
erythromycin biosynthesis sensory transduction protein eryC1
L2_021_000G1_scaffold_321_25
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25627..26205
DNA (579bp) protein (193aa)
wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-D-glucuronate N-acetyltransferase WbpD (EC:2.3.1.-)
UDP-2-acetamido-3-amino-2, 3-dideoxy-D-glucuronate N-acetyltransferase WbpD {ECO:0000313|EMBL:AGF59283.1}; EC=2.3.1.- {ECO:0000313|EMBL:AGF59283.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
UDP-2-acetamido-3-amino-2, 3-dideoxy-D-glucuronate N-acetyltransferase WbpD n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MT47_9CLOT
L2_021_000G1_scaffold_321_26
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26312..27628
DNA (1317bp) protein (439aa)
UDP-N-acetyl-D-glucosamine dehydrogenase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FY72_CLOPA
UDP-glucose 6-dehydrogenase
UDP-N-acetyl-D-glucosamine dehydrogenase {ECO:0000313|EMBL:ETD68387.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_021_000G1_scaffold_321_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27833..28681
DNA (849bp) protein (283aa)
Putative ribonuclease-like protein YfkH n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N025_CLOSA
Ribonuclease BN {ECO:0000313|EMBL:KHD15468.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
yfkH; putative ribonuclease-like protein YfkH
L2_021_000G1_scaffold_321_28
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28760..29107
DNA (348bp) protein (116aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U627_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
ssb2; single-stranded DNA-binding protein 1
L2_021_000G1_scaffold_321_29
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29596..29928
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWU4_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45279.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_321_30
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29979..30350
DNA (372bp) protein (124aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
acpS; holo-[acyl-carrier-protein] synthase AcpS (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUE0_9CLOT
Displaying items 1-30 of 58 in total

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