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L2_021_000G1_scaffold_335

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_335_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..890
DNA (888bp) protein (296aa)
Response regulator of the LytR/AlgR family n=1 Tax=Roseburia intestinalis M50/1 PF4_9FIRM">RepID=D4KPF4_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBL08756.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_335_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

887..1549
DNA (663bp) protein (221aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L335_9FIRM
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase {ECO:0000313|EMBL:CBL14025.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_021_000G1_scaffold_335_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1778..3634
DNA (1857bp) protein (619aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L336_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL14026.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_021_000G1_scaffold_335_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3609..5423
DNA (1815bp) protein (605aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L337_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL14027.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_021_000G1_scaffold_335_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5569..9702
DNA (4134bp) protein (1378aa)
Lyzozyme M1 (1,4-beta-N-acetylmuramidase) n=2 Tax=Roseburia intestinalis RepID=D4L338_9FIRM
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:EEV01829.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_021_000G1_scaffold_335_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9749..12103
DNA (2355bp) protein (785aa)
Listeria/Bacterioides repeat n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KPG0_9FIRM
Listeria/Bacterioides repeat {ECO:0000313|EMBL:CBL08762.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Listeria/Bacterioides repeat
L2_021_000G1_scaffold_335_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12114..13112
DNA (999bp) protein (333aa)
tRNA-dihydrouridine synthase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KPG1_9FIRM
tRNA-U20a,U20b-dihydrouridine synthase
tRNA-U20a,U20b-dihydrouridine synthase {ECO:0000313|EMBL:CBL08763.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_335_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13212..14765
DNA (1554bp) protein (518aa)
Beta-xylosidase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KPG2_9FIRM
Beta-xylosidase {ECO:0000313|EMBL:CBL08764.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Beta-xylosidase
L2_021_000G1_scaffold_335_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14878..16263
DNA (1386bp) protein (462aa)
Amino acid carrier protein n=2 Tax=Roseburia intestinalis RepID=D4L341_9FIRM
amino acid carrier protein
Amino acid carrier protein {ECO:0000313|EMBL:CBL14031.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_021_000G1_scaffold_335_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16448..17410
DNA (963bp) protein (321aa)
Predicted beta-xylosidase (EC:3.2.1.55)
Predicted beta-xylosidase {ECO:0000313|EMBL:CBL14032.1}; EC=3.2.1.55 {ECO:0000313|EMBL:CBL14032.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Predicted beta-xylosidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L342_9FIRM
L2_021_000G1_scaffold_335_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17427..18932
DNA (1506bp) protein (502aa)
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:CBL14033.1}; EC=3.2.1.55 {ECO:0000313|EMBL:CBL14033.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Alpha-L-arabinofuranosidase (EC:3.2.1.55)
Alpha-L-arabinofuranosidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L343_9FIRM
L2_021_000G1_scaffold_335_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19022..19264
DNA (243bp) protein (81aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7G8N4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA53854.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_335_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19305..20231)
DNA (927bp) protein (309aa)
Transcriptional regulator n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BKJ3_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDA53857.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_021_000G1_scaffold_335_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20263..20709)
DNA (447bp) protein (149aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Phosphoesterase MJ0936 family n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AYA2_9FIRM
phosphoesterase, MJ0936 family
L2_021_000G1_scaffold_335_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20915..21847
DNA (933bp) protein (311aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AS79_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDA53860.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
diguanylate cyclase (GGDEF) domain
L2_021_000G1_scaffold_335_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22238..24466
DNA (2229bp) protein (743aa)
formate acetyltransferase 1 (EC:2.3.1.54)
Formate C-acetyltransferase {ECO:0000313|EMBL:EEV01842.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EEV01842.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Formate acetyltransferase 1 n=3 Tax=Roseburia intestinalis RepID=D4KPG9_9FIRM
L2_021_000G1_scaffold_335_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24483..25232
DNA (750bp) protein (250aa)
pyruvate formate-lyase 1-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Pyruvate formate-lyase 1-activating enzyme n=4 Tax=Roseburia RepID=D4KPH0_9FIRM
L2_021_000G1_scaffold_335_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25232..25372
DNA (141bp) protein (47aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G8P1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA53866.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_335_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25448..25978
DNA (531bp) protein (177aa)
SSU ribosomal protein S30P/sigma 54 modulation protein n=5 Tax=Bacteria RepID=D4KPH2_9FIRM
SSU ribosomal protein S30P/sigma 54 modulation protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:CDA53867.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_335_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26400..27251)
DNA (852bp) protein (284aa)
EDD domain protein, DegV family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8P3_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:EEV01846.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
EDD domain protein, DegV family
L2_021_000G1_scaffold_335_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27434..27739
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7G8P4_9FIRM
Putative molybdopterin-guanine dinucleotide biosynthesis protein A {ECO:0000313|EMBL:CDA53871.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_021_000G1_scaffold_335_22

Not on your lists

28000..29055
DNA (1056bp) protein (352aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
D-alanine--D-alanine ligase n=2 Tax=Bacteria RepID=D4L351_9FIRM
L2_021_000G1_scaffold_335_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29111..30523
DNA (1413bp) protein (471aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AYB9_9FIRM
L2_021_000G1_scaffold_335_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30751..31485)
DNA (735bp) protein (245aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Acyltransferase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8P8_9FIRM
L2_021_000G1_scaffold_335_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31546..32052
DNA (507bp) protein (169aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6B4I0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA53876.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_335_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32198..32440
DNA (243bp) protein (81aa)
Uncharacterized protein conserved in bacteria n=4 Tax=Roseburia RepID=D4KPH7_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL14045.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_021_000G1_scaffold_335_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32505..34064
DNA (1560bp) protein (520aa)
LysM domain n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AP88_9FIRM
LysM domain.
LysM domain {ECO:0000313|EMBL:CDA53878.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_335_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34229..35557
DNA (1329bp) protein (443aa)
NlpC/P60 family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8Q3_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:EEV01777.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L2_021_000G1_scaffold_335_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35669..36106
DNA (438bp) protein (146aa)
Uncharacterized conserved protein n=4 Tax=Roseburia RepID=D4KPH9_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CDA53880.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_335_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36097..36972
DNA (876bp) protein (292aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974, ECO:0000313|EMBL:CBL14049.1};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Methionine aminopeptidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L359_9FIRM
Displaying items 1-30 of 42 in total

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