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L2_021_000G1_scaffold_336

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_336_1
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..143
DNA (141bp) protein (47aa)
Putative 3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EIQ79428.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EIQ79428.1};; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
3-oxoacyl-[ACP] reductase (EC:1.1.1.100)
Putative 3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SCA7_CITFR
L2_021_000G1_scaffold_336_2
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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140..1369
DNA (1230bp) protein (410aa)
FIG138576: 3-oxoacyl-[ACP] synthase {ECO:0000313|EMBL:CEJ64864.1}; EC=2.3.1.41 {ECO:0000313|EMBL:CEJ64864.1};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Beta-ketoacyl synthase, C-terminal domain protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HF85_SHIFL
3-oxoacyl-(acyl carrier protein) synthase II
L2_021_000G1_scaffold_336_3
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1371..1949
DNA (579bp) protein (193aa)
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:CEJ64863.1}; EC=2.7.8.- {ECO:0000313|EMBL:CEJ64863.1};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
4'-phosphopantetheinyl transferase AcpT n=1 Tax=Citrobacter sp. 30_2 RepID=C1MDG6_9ENTR
ACP synthase
L2_021_000G1_scaffold_336_4
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1999..2400
DNA (402bp) protein (134aa)
Nickel-responsive regulator n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIB2_9ENTR
Nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
nickel responsive regulator
L2_021_000G1_scaffold_336_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2497..3621)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8R408_CITFR
Inner membrane transport permease yhhJ {ECO:0000313|EMBL:ETX67426.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_021_000G1_scaffold_336_6
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3621..6368)
DNA (2748bp) protein (916aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HF81_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:EIQ79423.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
hypothetical protein
L2_021_000G1_scaffold_336_7
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6365..7432)
DNA (1068bp) protein (356aa)
HlyD secretion family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HF80_SHIFL
HlyD secretion family protein {ECO:0000313|EMBL:EIQ79422.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
membrane protein
L2_021_000G1_scaffold_336_8
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7538..7654
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HF79_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:CEJ64858.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
L2_021_000G1_scaffold_336_9
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7795..8961)
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC98_CITFR
Putative alcohol dehydrogenase {ECO:0000313|EMBL:GAL46230.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
alcohol dehydrogenase
L2_021_000G1_scaffold_336_10
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8995..9309)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC97_CITFR
Uncharacterized protein {ECO:0000313|EMBL:GAL46229.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
antibiotic biosynthesis monooxygenase
L2_021_000G1_scaffold_336_11
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9328..9903)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC96_CITFR
Putative transcription antiterminator {ECO:0000313|EMBL:GAL46228.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
transcriptional regulator
L2_021_000G1_scaffold_336_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9903..11459)
DNA (1557bp) protein (519aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC95_CITFR
FAD-linked oxidase
FAD-linked oxidase {ECO:0000313|EMBL:AHY10909.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_021_000G1_scaffold_336_13
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11456..13135)
DNA (1680bp) protein (560aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC94_CITFR
Putative glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:GAL46226.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
FAD-dependent oxidoreductase
L2_021_000G1_scaffold_336_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13132..14676)
DNA (1545bp) protein (515aa)
Glycerol kinase n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC93_CITFR
glycerol kinase
Glycerol kinase {ECO:0000313|EMBL:AHY10911.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_021_000G1_scaffold_336_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14673..15971)
DNA (1299bp) protein (433aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC92_CITFR
MFS transporter
MFS transporter {ECO:0000313|EMBL:AHY10912.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_021_000G1_scaffold_336_16
unknown

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16364..16492
DNA (129bp) protein (43aa)

This feature has no annotations

L2_021_000G1_scaffold_336_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16699..17988
DNA (1290bp) protein (430aa)
D-galactonate transporter n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC91_CITFR
transporter
Transporter {ECO:0000313|EMBL:AHY10913.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_021_000G1_scaffold_336_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17960..18985
DNA (1026bp) protein (342aa)
Chlorophyll synthesis pathway, bchC n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC90_CITFR
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AHY10914.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_021_000G1_scaffold_336_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19006..20190
DNA (1185bp) protein (395aa)
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Mannonate dehydratase n=1 Tax=Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15 str. 01-0170 RepID=V2ID65_SALDZ
L2_021_000G1_scaffold_336_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20296..21768
DNA (1473bp) protein (491aa)
D-mannonate oxidoreductase n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC88_CITFR
D-mannonate oxidoreductase
D-mannonate oxidoreductase {ECO:0000313|EMBL:AHY10916.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_021_000G1_scaffold_336_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21779..22450)
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC87_CITFR
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AHY10917.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_021_000G1_scaffold_336_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22594..23787)
DNA (1194bp) protein (398aa)
HI0933 family flavoprotein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MDH3_9ENTR
Oxidoreductase {ECO:0000313|EMBL:ETX61467.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
membrane protein
L2_021_000G1_scaffold_336_23
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24017..25516
DNA (1500bp) protein (500aa)
Low-affinity inorganic phosphate transporter 1 n=1 Tax=Shigella flexneri 1235-66 RepID=I6HF75_SHIFL
Low-affinity inorganic phosphate transporter {ECO:0000313|EMBL:CEJ64854.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
phosphate transporter PitA
L2_021_000G1_scaffold_336_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25581..25916)
DNA (336bp) protein (112aa)
Universal stress protein B n=12 Tax=Enterobacteriaceae RepID=C1MDH5_9ENTR
universal stress protein UspB
Universal stress protein B {ECO:0000256|HAMAP-Rule:MF_01088, ECO:0000256|SAAS:SAAS00025222}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L2_021_000G1_scaffold_336_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26310..26747
DNA (438bp) protein (146aa)
Universal stress protein n=12 Tax=Enterobacteriaceae RepID=C1MDH6_9ENTR
universal stress global response regulator UspA
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
L2_021_000G1_scaffold_336_26
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27029..28501
DNA (1473bp) protein (491aa)
Dipeptide and tripeptide permease B n=2 Tax=Citrobacter RepID=C1MDH7_9ENTR
Dipeptide and tripeptide permease B {ECO:0000256|HAMAP-Rule:MF_01879}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
tppB; peptide ABC transporter permease
L2_021_000G1_scaffold_336_27
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28588..29091)
DNA (504bp) protein (168aa)
Rrf2 family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HDV9_SHIFL
Predicted transcriptional regulator of NADH dehydrogenase, Rrf2 family {ECO:0000313|EMBL:CEJ64849.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
hypothetical protein
L2_021_000G1_scaffold_336_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29323..30522
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DJB9_CITFR
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KJC03876.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_021_000G1_scaffold_336_29
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30627..31376)
DNA (750bp) protein (250aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073131}; EC=2.1.1.242 {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073130};; 16S rRNA m2G1516 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; rRNA (guanine-N(2)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Ribosomal RNA small subunit methyltransferase J n=2 Tax=Citrobacter RepID=C1MDI0_9ENTR
methyltransferase
L2_021_000G1_scaffold_336_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31511..33553)
DNA (2043bp) protein (681aa)
Oligopeptidase A n=1 Tax=Citrobacter sp. 30_2 RepID=C1MDI1_9ENTR
Oligopeptidase A {ECO:0000313|EMBL:ETX61475.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
oligopeptidase A
Displaying items 1-30 of 45 in total

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