ggKbase home page

L2_021_000G1_scaffold_345

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_345_1
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..89)
DNA (87bp) protein (29aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0AAL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11340.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L2_021_000G1_scaffold_345_2
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(110..643)
DNA (534bp) protein (178aa)
Segregation and condensation protein B n=2 Tax=Clostridiales RepID=B0AAM0_9FIRM
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
scpB; segregation and condensation protein B
L2_021_000G1_scaffold_345_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(645..1376)
DNA (732bp) protein (244aa)
Segregation and condensation protein A n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAM1_9FIRM
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
scpA; segregation and condensation protein A
L2_021_000G1_scaffold_345_4
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1377..1976)
DNA (600bp) protein (200aa)
Peptidase M50 family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X6P0_9CLOT
Peptidase M50 family {ECO:0000313|EMBL:CDA11343.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
membrane-associated peptidase
L2_021_000G1_scaffold_345_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2157..3308)
DNA (1152bp) protein (384aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAM3_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDQ96411.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
D-alanyl-D-alanine carboxypeptidase
L2_021_000G1_scaffold_345_6
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3495..5171)
DNA (1677bp) protein (559aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0AAM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11345.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ribonuclease J family protein
L2_021_000G1_scaffold_345_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5424..5867)
DNA (444bp) protein (148aa)
Transcriptional regulator, Fur family n=2 Tax=Clostridiales RepID=B0AAM5_9FIRM
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDQ96413.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
fur; ferric uptake regulation protein
L2_021_000G1_scaffold_345_8
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6170..6451)
DNA (282bp) protein (94aa)
UPF0473 protein CLOBAR_02181 n=2 Tax=Clostridiales RepID=B0AAM6_9FIRM
UPF0473 protein BN488_02374 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_021_000G1_scaffold_345_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6550..6975)
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Putative Holliday junction resolvase n=2 Tax=Clostridiales RepID=B0AAM7_9FIRM
holliday junction resolvase
L2_021_000G1_scaffold_345_10
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7132..9330)
DNA (2199bp) protein (733aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XG05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA11349.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
membrane protein
L2_021_000G1_scaffold_345_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9435..9692)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0AAM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96417.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_021_000G1_scaffold_345_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9765..12404)
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Alanine--tRNA ligase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAN0_9FIRM
alaS; alanyl-tRNA synthetase
L2_021_000G1_scaffold_345_13
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12795..13883)
DNA (1089bp) protein (363aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Clostridiales RepID=B0AAN1_9FIRM
L2_021_000G1_scaffold_345_14
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14023..14463)
DNA (441bp) protein (147aa)
Fe-S iron-sulfur cluster assembly protein, NifU family n=2 Tax=Clostridiales RepID=B0AAN2_9FIRM
Fe-S iron-sulfur cluster assembly protein NifU family {ECO:0000313|EMBL:CDA11353.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
NifU-like protein
L2_021_000G1_scaffold_345_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14607..15806)
DNA (1200bp) protein (400aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
iscS2; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAN3_9FIRM
L2_021_000G1_scaffold_345_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15820..16293)
DNA (474bp) protein (158aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Clostridiales RepID=B0AAN4_9FIRM
Transcriptional regulator Rrf2 family {ECO:0000313|EMBL:CDA11355.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
RRF2 family transcriptional regulator
L2_021_000G1_scaffold_345_17
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16481..17260)
DNA (780bp) protein (260aa)
Acetyltransferase GNAT family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XRC0_9CLOT
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDA11356.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
acetyltransferase
L2_021_000G1_scaffold_345_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17405..18676)
DNA (1272bp) protein (424aa)
ATPase, AAA family n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAN6_9FIRM
ATPase, AAA family {ECO:0000313|EMBL:EDQ96424.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ATPase-like MgsA
L2_021_000G1_scaffold_345_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18768..19553)
DNA (786bp) protein (262aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=2 Tax=Clostridiales RepID=B0AAN7_9FIRM
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
transcriptional repressor CodY
L2_021_000G1_scaffold_345_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19727..21805)
DNA (2079bp) protein (693aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
DNA topoisomerase 1 n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XG13_9CLOT
topA; DNA topoisomerase I
L2_021_000G1_scaffold_345_21
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21829..24492)
DNA (2664bp) protein (888aa)
Mg chelatase-like protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XRC5_9CLOT
Mg chelatase-like protein {ECO:0000313|EMBL:CDA11361.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
competence protein
L2_021_000G1_scaffold_345_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24505..24876)
DNA (372bp) protein (124aa)
UPF0102 protein CLOBAR_02196 n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAP1_9FIRM
UPF0102 protein CLOBAR_02196 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_021_000G1_scaffold_345_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25011..26282
DNA (1272bp) protein (424aa)
Bacterial capsule synthesis protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAP2_9FIRM
Bacterial capsule synthesis protein {ECO:0000313|EMBL:EDQ96430.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
CapA domain-containing protein
L2_021_000G1_scaffold_345_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26360..26995)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XG17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA11364.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_021_000G1_scaffold_345_25

Not on your lists

comp(27176..28195)
DNA (1020bp) protein (340aa)
Dehydrogenase, FMN-dependent n=2 Tax=Clostridiales RepID=B0AAP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17260.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
FMN-dependent dehydrogenase
L2_021_000G1_scaffold_345_26
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28265..29032)
DNA (768bp) protein (256aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Ribonuclease HII n=2 Tax=Clostridiales RepID=B0AAP5_9FIRM
rnhB; ribonuclease HII
L2_021_000G1_scaffold_345_27
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29181..30482)
DNA (1302bp) protein (434aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAP6_9FIRM
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EDQ96434.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
branched chain amino acid transport system carrier protein
L2_021_000G1_scaffold_345_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30679..31578)
DNA (900bp) protein (300aa)
Ribosome biogenesis GTPase A n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAP7_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
GTPase
L2_021_000G1_scaffold_345_29
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(31760..32113)
DNA (354bp) protein (118aa)
50S ribosomal protein L19 n=2 Tax=Clostridiales RepID=B0AAP8_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rplS; 50S ribosomal protein L19
L2_021_000G1_scaffold_345_30
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32209..32904)
DNA (696bp) protein (232aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
tRNA (guanine-N(1)-)-methyltransferase n=2 Tax=Clostridiales RepID=B0AAP9_9FIRM
tRNA (Guanine-n(1)-)-methyltransferase
Displaying items 1-30 of 46 in total

View Taxonomy