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L2_021_000G1_scaffold_347

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_347_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..583)
DNA (582bp) protein (194aa)
ABC transporter family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VVY1_CLOBI
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:AIY84681.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_021_000G1_scaffold_347_2
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(871..2073)
DNA (1203bp) protein (401aa)
Putative Transporter, major facilitator family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EZK1_9CLOT
major facilitator family transporter
Major facilitator family transporter {ECO:0000313|EMBL:CDM69025.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_021_000G1_scaffold_347_3
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2176..2967
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LXK2_CLOB8
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABR35082.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_021_000G1_scaffold_347_4
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2968..3336)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CP01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI92219.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
L2_021_000G1_scaffold_347_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3424..4773)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XX22_9CLOT
ftsX-like permease family protein
Uncharacterized protein {ECO:0000313|EMBL:KJU73022.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_021_000G1_scaffold_347_6
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4795..6468)
DNA (1674bp) protein (558aa)
ABC-type transport system, permease n=1 Tax=Clostridium difficile E7 RepID=U4ATL8_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM67569.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_021_000G1_scaffold_347_7
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6472..7134)
DNA (663bp) protein (221aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A12F7
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOS76514.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
antimicrobial peptide ABC transporter ATPase
L2_021_000G1_scaffold_347_8
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7454..8473)
DNA (1020bp) protein (340aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
histidine kinase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288EFD7
signal transduction histidine kinase
L2_021_000G1_scaffold_347_9
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8475..9161)
DNA (687bp) protein (229aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B3E5_CLOA9
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AFS79697.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L2_021_000G1_scaffold_347_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9266..9862)
DNA (597bp) protein (199aa)
lacA; isomerase/acetyltransferase (EC:2.3.1.18)
Isomerase/acetyltransferase {ECO:0000313|EMBL:AIY82309.1}; EC=2.3.1.18 {ECO:0000313|EMBL:AIY82309.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
maltose O-acetyltransferase n=1 Tax=Lactobacillus farciminis RepID=UPI00021979CF
L2_021_000G1_scaffold_347_11
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10083..11270)
DNA (1188bp) protein (396aa)
Putative GTP-binding protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EY01_9CLOT
Putative GTP-binding protein {ECO:0000313|EMBL:CDG01146.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hydF; [FeFe] hydrogenase H-cluster maturation GTPase HydF
L2_021_000G1_scaffold_347_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11279..12655)
DNA (1377bp) protein (459aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH07_9CLOT
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EEH98499.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hydG; [FeFe] hydrogenase H-cluster radical SAM maturase HydG
L2_021_000G1_scaffold_347_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12646..13713)
DNA (1068bp) protein (356aa)
Iron-only hydrogenase maturation rSAM protein HydE n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF96_9CLOT
Iron-only hydrogenase maturation rSAM protein HydE {ECO:0000313|EMBL:EEH98500.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hydE; [FeFe] hydrogenase H-cluster radical SAM maturase HydE
L2_021_000G1_scaffold_347_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13715..13963)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F7Y9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84190.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_021_000G1_scaffold_347_15
unknown

Not on your lists

14232..14405
DNA (174bp) protein (58aa)

This feature has no annotations

L2_021_000G1_scaffold_347_16
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14560..15810)
DNA (1251bp) protein (417aa)
ABC-2 transporter family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0DXV4_CLOSO
Putative ABC transporter permease {ECO:0000313|EMBL:CEP99593.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
sodium transport system permease
L2_021_000G1_scaffold_347_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15810..16781)
DNA (972bp) protein (324aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIA7_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EKY27400.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
sodium transport system ATP-binding protein
L2_021_000G1_scaffold_347_18
unknown

Not on your lists

comp(16949..17404)
DNA (456bp) protein (152aa)

This feature has no annotations

L2_021_000G1_scaffold_347_19
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17509..18066
DNA (558bp) protein (186aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV00_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EOD00457.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
GCN5-like N-acetyltransferase
L2_021_000G1_scaffold_347_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18126..19412)
DNA (1287bp) protein (429aa)
MFS transporter n=1 Tax=Bacillus sp. 10403023 RepID=UPI0002885A30
MFS transporter {ECO:0000313|EMBL:KJU72957.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
major facilitator transporter
L2_021_000G1_scaffold_347_21
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19425..20711)
DNA (1287bp) protein (429aa)
Putative Phosphodiesterase/nucleotide pyrophosphatase family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ESU2_9CLOT
Putative Phosphodiesterase/nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:CDG02290.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
phosphodiesterase/nucleotide pyrophosphatase family protein
L2_021_000G1_scaffold_347_22
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20781..21563)
DNA (783bp) protein (261aa)
hisK; Histidinol-phosphatase (EC:3.1.3.15)
Histidinol-phosphatase {ECO:0000313|EMBL:CDM69673.1}; EC=3.1.3.15 {ECO:0000313|EMBL:CDM69673.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Histidinol phosphate phosphatase, HisJ family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U7A8_9CLOT
L2_021_000G1_scaffold_347_23
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21700..23100
DNA (1401bp) protein (467aa)
MATE efflux family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDN0_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EKY25780.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
MATE efflux family protein
L2_021_000G1_scaffold_347_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23180..23566)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BDL9_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EDS76415.1}; TaxID=445337 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C str. Eklund.;"
hypothetical protein
L2_021_000G1_scaffold_347_25
unknown

Not on your lists

23692..24426
DNA (735bp) protein (245aa)

This feature has no annotations

L2_021_000G1_scaffold_347_26
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24474..25430)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PFW7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB86627.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
L2_021_000G1_scaffold_347_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25438..25962)
DNA (525bp) protein (175aa)
PAP2 family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN77_9CLOT
PAP2 family protein {ECO:0000313|EMBL:EKY29454.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
membrane-associated phospholipid phosphatase
L2_021_000G1_scaffold_347_28
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26094..26885)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4J9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHJ01574.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
ABC transporter permease
L2_021_000G1_scaffold_347_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26879..27580)
DNA (702bp) protein (234aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UQM1_CLOBO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EES49997.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
ABC transporter ATP-binding protein
L2_021_000G1_scaffold_347_30
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27581..27949)
DNA (369bp) protein (123aa)
GntR-family transcriptional regulator n=3 Tax=Clostridium butyricum RepID=B1QZS2_CLOBU
Transcriptional regulator, GntR family {ECO:0000313|EMBL:KJZ86520.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
yhcF; HTH-type transcriptional regulator YhcF
Displaying items 1-30 of 51 in total

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