ggKbase home page

L2_021_000G1_scaffold_358

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_358_1
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1..180
DNA (180bp) protein (60aa)
Uncharacterized protein n=5 Tax=Lactobacillus casei group RepID=K6QUU7_LACCA
Uncharacterized protein {ECO:0000313|EMBL:EPC28658.1}; TaxID=1256221 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp22.;"
L2_021_000G1_scaffold_358_2
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

177..683
DNA (507bp) protein (169aa)
UPF0735 ACT domain-containing protein LBPG_00770 n=5 Tax=Lactobacillus casei group RepID=C5F3G3_LACPA
hypothetical protein
UPF0735 ACT domain-containing protein LBPG_00770 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
L2_021_000G1_scaffold_358_3
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

708..1211
DNA (504bp) protein (168aa)
Uncharacterized protein n=52 Tax=Lactobacillus casei group RepID=C5F3G2_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC89875.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L2_021_000G1_scaffold_358_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1292..1627)
DNA (336bp) protein (112aa)
Uncharacterized protein n=9 Tax=Lactobacillus casei group RepID=S6CHM7_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EEI66950.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
acetyl-CoA carboxylase, carboxyltransferase component-like protein
L2_021_000G1_scaffold_358_5
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1605..2912)
DNA (1308bp) protein (436aa)
DNA repair nucleotidyltransferase/polymerase (EC:2.7.7.7)
DNA repair nucleotidyltransferase/polymerase {ECO:0000313|EMBL:EKQ13418.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EKQ13418.1};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Nucleotidyltransferase/DNA polymerase for DNA repair n=24 Tax=Lactobacillus casei group RepID=C5F3F6_LACPA
L2_021_000G1_scaffold_358_6
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3047..3223)
DNA (177bp) protein (59aa)
Uncharacterized protein n=50 Tax=Lactobacillus casei group RepID=C5F3F5_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC87055.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L2_021_000G1_scaffold_358_7
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3359..4555)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=10 Tax=Lactobacillus casei group RepID=S6BIS0_LACPA
Uncharacterized protein {ECO:0000313|EMBL:BAN71283.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
membrane protein
L2_021_000G1_scaffold_358_8
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4559..5350)
DNA (792bp) protein (264aa)
Lysophospholipase L1 related esterase n=10 Tax=Lactobacillus casei group RepID=D8GFL8_LACCZ
Lysophospholipase L1 related esterase
Lysophospholipase L1 related esterase {ECO:0000313|EMBL:AGP67910.1}; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
L2_021_000G1_scaffold_358_9
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5382..5702)
DNA (321bp) protein (107aa)
Uncharacterized protein n=7 Tax=Lactobacillus casei group RepID=S6CHM8_LACPA
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:BAN71285.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
L2_021_000G1_scaffold_358_10
unknown

Not on your lists

5873..6061
DNA (189bp) protein (63aa)

This feature has no annotations

L2_021_000G1_scaffold_358_11
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6168..8423
DNA (2256bp) protein (752aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
ATP-dependent DNA helicase n=10 Tax=Lactobacillus casei group RepID=K6PSF3_LACCA
ATP-dependent DNA helicase PcrA
L2_021_000G1_scaffold_358_12
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8480..10504
DNA (2025bp) protein (675aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
DNA ligase n=8 Tax=Lactobacillus paracasei subsp. paracasei RepID=S6C403_LACPA
DNA ligase LigA
L2_021_000G1_scaffold_358_13
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10514..11665
DNA (1152bp) protein (384aa)
Uncharacterized protein n=34 Tax=Lactobacillus casei group RepID=D8GFM2_LACCZ
Putative pheromone cAM373 precursor lipoprotein CamS
CamS family putative pheromone lipoprotein {ECO:0000313|EMBL:EKQ03753.1}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L2_021_000G1_scaffold_358_14
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11717..12013
DNA (297bp) protein (99aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1051657 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei M36.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=55 Tax=Lactobacillus casei group RepID=B3WD56_LACCB
Aspartyl-tRNA amidotransferase subunit C
L2_021_000G1_scaffold_358_15
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12017..13471
DNA (1455bp) protein (485aa)
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=31 Tax=Lactobacillus casei group RepID=GATA_LACCB
L2_021_000G1_scaffold_358_16
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13473..14903
DNA (1431bp) protein (477aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=35 Tax=Lactobacillus casei group RepID=GATB_LACCB
aspartyl/glutamyl-tRNA amidotransferase subunit B
L2_021_000G1_scaffold_358_17
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15176..16210
DNA (1035bp) protein (345aa)
Diacylglycerol kinase catalytic domain-containing transcriptional regulator {ECO:0000313|EMBL:EKQ13429.1}; EC=2.7.1.107 {ECO:0000313|EMBL:EKQ13429.1};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Diacylglycerol kinase n=47 Tax=Lactobacillus casei group RepID=B3WD59_LACCB
Transcription regulator contains diacylglycerol kinase catalytic domain
L2_021_000G1_scaffold_358_18
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16212..17576
DNA (1365bp) protein (455aa)
RNA methyltransferase n=6 Tax=Lactobacillus casei group RepID=S6BIS9_LACPA
TrmA family RNA methyltransferase {ECO:0000313|EMBL:EKQ13430.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
RNA methyltransferase
L2_021_000G1_scaffold_358_19
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18137..19381
DNA (1245bp) protein (415aa)
MFS transporter permease n=6 Tax=Lactobacillus casei group RepID=U6SAU1_LACCA
MFS transporter permease {ECO:0000313|EMBL:ERN48583.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
major facilitator superfamily permease
L2_021_000G1_scaffold_358_20
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19410..20246
DNA (837bp) protein (279aa)
Cof-like hydrolase n=9 Tax=Lactobacillus paracasei subsp. paracasei RepID=C2FGN5_LACPA
Putative hydrolase {ECO:0000313|EMBL:BAN71296.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
cof protein
L2_021_000G1_scaffold_358_21
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20326..21201)
DNA (876bp) protein (292aa)
Polyphosphate:nucleotide phosphotransferase, PPK2 family {ECO:0000313|EMBL:EEI67006.1}; EC=2.7.4.- {ECO:0000313|EMBL:EEI67006.1};; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
Polyphosphate:AMP phosphotransferase n=10 Tax=Lactobacillus paracasei subsp. paracasei RepID=C5F3D8_LACPA
polyphosphate:AMP phosphotransferase
L2_021_000G1_scaffold_358_22
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21370..23274
DNA (1905bp) protein (635aa)
Neutral endopeptidase {ECO:0000313|EMBL:EKQ20225.1}; EC=3.4.24.- {ECO:0000313|EMBL:EKQ20225.1};; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
neutral endopeptidase (EC:3.4.24.-)
Neutral endopeptidase n=2 Tax=Lactobacillus casei group RepID=K6S5I3_LACCA
L2_021_000G1_scaffold_358_23
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23403..24818
DNA (1416bp) protein (472aa)
Transporter protein n=19 Tax=Lactobacillus casei group RepID=S6BZ42_LACPA
major facilitator superfamily permease
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEI67004.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L2_021_000G1_scaffold_358_24
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24904..25356)
DNA (453bp) protein (151aa)
Acetyltransferase n=1 Tax=Lactobacillus casei (strain ATCC 334) RepID=Q03AB1_LACC3
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:GAN36586.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L2_021_000G1_scaffold_358_25
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25654..26526)
DNA (873bp) protein (291aa)
Uncharacterized protein n=33 Tax=Lactobacillus casei group RepID=C5F3D4_LACPA
DegV family protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ65295.1}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
L2_021_000G1_scaffold_358_26
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26784..27710)
DNA (927bp) protein (309aa)
Protein QmcA n=32 Tax=Lactobacillus casei group RepID=K0NA10_LACCA
peptidase
Putative stomatin/prohibitin-family membrane protease subunit {ECO:0000313|EMBL:EKQ13438.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
L2_021_000G1_scaffold_358_27
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27795..27989)
DNA (195bp) protein (65aa)
Uncharacterized protein n=36 Tax=Lactobacillus casei group RepID=C5F3D2_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC87072.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L2_021_000G1_scaffold_358_28
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28496..29233
DNA (738bp) protein (246aa)
putative lysozyme (EC:3.2.1.17)
Lyzozyme M1 (1,4-beta-N-acetylmuramidase) n=11 Tax=Lactobacillus casei group RepID=S2MXR7_LACPA
Lyzozyme M1 (1,4-beta-N-acetylmuramidase) {ECO:0000313|EMBL:EPC32490.1}; TaxID=1256221 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp22.;"
L2_021_000G1_scaffold_358_29
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29366..29722
DNA (357bp) protein (119aa)
Uncharacterized protein n=55 Tax=Lactobacillus casei group RepID=C5F3C9_LACPA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ13441.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
L2_021_000G1_scaffold_358_30
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29934..30290)
DNA (357bp) protein (119aa)
Uncharacterized protein n=54 Tax=Lactobacillus casei group RepID=C5F3C7_LACPA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC90203.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
Displaying items 1-30 of 49 in total

View Taxonomy