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L2_021_000G1_scaffold_386

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_386_1
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..1763)
DNA (1761bp) protein (587aa)
Transketolase, C-terminal domain protein n=2 Tax=Bacteroidales RepID=C7X724_9PORP
Dehydrogenase E1 component {ECO:0000313|EMBL:EFI09480.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
2-oxoisovalerate dehydrogenase subunit beta
L2_021_000G1_scaffold_386_2
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1786..3120)
DNA (1335bp) protein (445aa)
2-oxo acid dehydrogenase acyltransferase (Catalytic domain) n=4 Tax=Bacteroidales RepID=C7X725_9PORP
2-oxoisovalerate dehydrogenase E2 component, dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:EFI09481.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex
L2_021_000G1_scaffold_386_3
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3224..3967)
DNA (744bp) protein (248aa)
Lipoyltransferase and lipoate-protein ligase n=4 Tax=Bacteroidales RepID=C7X726_9PORP
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EFI09482.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
lipoate-protein ligase A
L2_021_000G1_scaffold_386_4
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3996..5351)
DNA (1356bp) protein (452aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Dihydrolipoyl dehydrogenase n=4 Tax=Bacteroidales RepID=C7X727_9PORP
dihydrolipoamide dehydrogenase
L2_021_000G1_scaffold_386_5
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5361..5975)
DNA (615bp) protein (205aa)
Nitroreductase family protein n=5 Tax=Bacteroidales RepID=C7X728_9PORP
Nitroreductase {ECO:0000313|EMBL:EFI09484.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
nitroreductase
L2_021_000G1_scaffold_386_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


6198..6437
DNA (240bp) protein (80aa)
50S ribosomal protein L28 n=10 Tax=Bacteroidales RepID=RL28_PARD8
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_021_000G1_scaffold_386_7
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


6457..6645
DNA (189bp) protein (63aa)
50S ribosomal protein L33 n=9 Tax=Bacteroidales RepID=RL33_PARD8
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_021_000G1_scaffold_386_8
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6662..6814
DNA (153bp) protein (51aa)
Uncharacterized protein n=18 Tax=Bacteroidales RepID=A7AEM7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEY85189.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L2_021_000G1_scaffold_386_9
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7034..8158
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
DNA polymerase III subunit beta n=8 Tax=Bacteroidales RepID=A6L9V1_PARD8
DNA polymerase III subunit beta
L2_021_000G1_scaffold_386_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8169..8939
DNA (771bp) protein (257aa)
DNA polymerase III epsilon chain n=9 Tax=Bacteroidales RepID=A6L9V2_PARD8
DNA polymerase III subunit epsilon
DNA polymerase III epsilon chain {ECO:0000313|EMBL:ABR42466.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_021_000G1_scaffold_386_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8944..10095
DNA (1152bp) protein (384aa)
Alcohol dehydrogenase n=4 Tax=Bacteroidales RepID=A6L9V3_PARD8
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:ABR42467.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_021_000G1_scaffold_386_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10145..11350
DNA (1206bp) protein (402aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=4 Tax=Bacteroidales RepID=C7X735_9PORP
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:EKN22833.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
flavoprotein
L2_021_000G1_scaffold_386_13
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11347..12258
DNA (912bp) protein (304aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6L9V5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB49828.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L2_021_000G1_scaffold_386_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12266..13930
DNA (1665bp) protein (555aa)
DNA repair protein RecN n=5 Tax=Bacteroidales RepID=A6L9V6_PARD8
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
DNA repair protein recN
L2_021_000G1_scaffold_386_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14006..14638
DNA (633bp) protein (211aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6L9V7_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR42471.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_021_000G1_scaffold_386_16
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14635..14823)
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BA01_9PORP
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EFK62852.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
two-component system response regulator
L2_021_000G1_scaffold_386_17
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14892..15413)
DNA (522bp) protein (174aa)
Two-component system response regulator n=4 Tax=Bacteroidales RepID=A6L9V8_PARD8
two-component system response regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU51897.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_021_000G1_scaffold_386_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15406..16446)
DNA (1041bp) protein (347aa)
Histidine kinase n=6 Tax=Bacteroidales RepID=C7X740_9PORP
two-component system sensor histidine kinase
Putative two-component system sensor histidine kinase {ECO:0000313|EMBL:ABR42473.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_021_000G1_scaffold_386_19
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16450..17760)
DNA (1311bp) protein (437aa)
Outer membrane protein n=4 Tax=Bacteroidales RepID=A6L9W0_PARD8
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:EFI09498.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L2_021_000G1_scaffold_386_20
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17770..20811)
DNA (3042bp) protein (1014aa)
Transporter, AcrB/D/F family n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ11_9BACE
Transporter, AcrB/D/F family {ECO:0000313|EMBL:EFI09499.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
AcrB/AcrD/AcrF family transporter
L2_021_000G1_scaffold_386_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20817..21344)
DNA (528bp) protein (176aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AGY6_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KDS68474.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
multidrug efflux system protein
L2_021_000G1_scaffold_386_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21341..21856)
DNA (516bp) protein (172aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AGY6_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KDS68474.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
multidrug efflux system protein
L2_021_000G1_scaffold_386_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22229..22819
DNA (591bp) protein (197aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Thymidine kinase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ12_9BACE
thymidine kinase
L2_021_000G1_scaffold_386_24
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22869..23615
DNA (747bp) protein (249aa)
RNA methyltransferase, TrmH family, group 3 n=4 Tax=Bacteroidales RepID=C7X745_9PORP
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EEU51903.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
tRNA/rRNA methyltransferase
L2_021_000G1_scaffold_386_25
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23643..24023
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=8 Tax=Bacteroidales RepID=D7IQ14_9BACE
translation initiation inhibitor endoribonuclease L-PSP
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EFK62845.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L2_021_000G1_scaffold_386_26
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24150..26000)
DNA (1851bp) protein (617aa)
UPF0313 protein HMPREF0104_01515 n=2 Tax=Bacteroidales RepID=D7IQ15_9BACE
UPF0313 protein HMPREF0104_01515 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L2_021_000G1_scaffold_386_27
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26155..27156
DNA (1002bp) protein (334aa)
Malate dehydrogenase n=6 Tax=Bacteroidales RepID=A6L9W7_PARD8
malate dehydrogenase
Malate dehydrogenase {ECO:0000313|EMBL:EFI09504.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L2_021_000G1_scaffold_386_28
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27241..28395)
DNA (1155bp) protein (385aa)
Alkylhydroperoxidase AhpD family core domain-containing protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ17_9BACE
Alkylhydroperoxidase AhpD family core domain-containing protein {ECO:0000313|EMBL:EFI09505.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
carboxymuconolactone decarboxylase
L2_021_000G1_scaffold_386_29
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28594..31086)
DNA (2493bp) protein (831aa)
Alanyl dipeptidyl peptidase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ18_9BACE
Alanyl dipeptidyl peptidase {ECO:0000313|EMBL:EFI09506.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
alanyl dipeptidyl peptidase
L2_021_000G1_scaffold_386_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31098..31679)
DNA (582bp) protein (194aa)
Methyltransferase domain protein n=6 Tax=Bacteroidales RepID=C7X751_9PORP
methyltransferase
Methyltransferase domain protein {ECO:0000313|EMBL:KDS68470.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Displaying items 1-30 of 44 in total

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