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L2_021_000G1_scaffold_389

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_389_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..686)
-----------------
DNA (684bp)
protein (228aa)
Integrase catalytic region n=2 Tax=Bifidobacterium RepID=R5MY50_9BIFI
integrase
Integrase {ECO:0000313|EMBL:AIW44788.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_000G1_scaffold_389_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(695..1210)
-----------------
DNA (516bp)
protein (172aa)
Transposase n=9 Tax=Bifidobacterium RepID=B3DRC0_BIFLD
transposase
Transposase {ECO:0000313|EMBL:AIW44787.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_000G1_scaffold_389_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1307..2692)
-----------------
DNA (1386bp)
protein (462aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MU45_BIFL1
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71289.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_021_000G1_scaffold_389_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3076..4011)
-----------------
DNA (936bp)
protein (312aa)
Permease of the drug/metabolite transporter (DMT) superfamily n=7 Tax=Bifidobacterium longum RepID=S3DML2_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71288.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_021_000G1_scaffold_389_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4290..4694
-----------------
DNA (405bp)
protein (135aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=Q8G4E3_BIFLO
hypothetical protein
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:ESV33715.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_021_000G1_scaffold_389_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4722..6017)
-----------------
DNA (1296bp)
protein (432aa)
SAM-dependent methyltransferase n=4 Tax=Bifidobacterium RepID=B3DRC6_BIFLD
hypothetical protein
DNA methyltransferase {ECO:0000313|EMBL:KEY31376.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_021_000G1_scaffold_389_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6086..6931
-----------------
DNA (846bp)
protein (282aa)
Phosphoglycerate mutase family protein n=10 Tax=Bifidobacterium RepID=B3DRC7_BIFLD
phosphoglycerate mutase
Putative phosphoglycerate mutase {ECO:0000313|EMBL:BAJ66819.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_021_000G1_scaffold_389_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7046..7996
-----------------
DNA (951bp)
protein (317aa)
Mg2+ and Co2+ transporter n=16 Tax=Bifidobacterium RepID=B3DRC8_BIFLD
magnesium and cobalt transport protein
Magnesium and cobalt transport protein CorA {ECO:0000313|EMBL:ESV33712.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_021_000G1_scaffold_389_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8092..8937
-----------------
DNA (846bp)
protein (282aa)
ABC-type amino acid transport/signal transduction systems periplasmic component n=4 Tax=Bifidobacterium longum RepID=B3DRC9_BIFLD
ABC transporter substrate-binding protein
ABC transporter substrate binding component {ECO:0000313|EMBL:BAJ66817.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_021_000G1_scaffold_389_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8980..11943
-----------------
DNA (2964bp)
protein (988aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Leucine--tRNA ligase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MU38_BIFL1
leucyl-tRNA synthase
L2_021_000G1_scaffold_389_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12179..12883
-----------------
DNA (705bp)
protein (235aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4D7_BIFLO
competence protein ComEA helix-hairpin-helix repeat region
DNA uptake protein {ECO:0000313|EMBL:ACD97775.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_000G1_scaffold_389_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12880..14634
-----------------
DNA (1755bp)
protein (585aa)
ComEC/Rec2-like protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GXP5_BIFLN
Competence protein {ECO:0000313|EMBL:KHD94861.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
comEC; comec
L2_021_000G1_scaffold_389_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14774..16120
-----------------
DNA (1347bp)
protein (449aa)
Prolidase (X-Pro dipeptidase) or chlorohydrolase like protein n=2 Tax=Bifidobacterium longum RepID=S3DMK4_BIFLN
amidohydrolase
Imidazolonepropionase {ECO:0000313|EMBL:KHD94860.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L2_021_000G1_scaffold_389_14
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16187..17158
-----------------
DNA (972bp)
protein (324aa)
DNA polymerase III delta subunit n=8 Tax=Bifidobacterium RepID=E8MJ58_BIFL2
DNA polymerase III delta subunit
DNA polymerase III delta subunit {ECO:0000313|EMBL:CCY95557.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_021_000G1_scaffold_389_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17179..17745
-----------------
DNA (567bp)
protein (189aa)
Uncharacterized protein n=15 Tax=Bifidobacterium RepID=V6XWM7_BIFLN
hypothetical protein
ATPase {ECO:0000313|EMBL:KEY22833.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_021_000G1_scaffold_389_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17807..18688
-----------------
DNA (882bp)
protein (294aa)
Glycoprotease family protein n=2 Tax=Bifidobacterium longum RepID=T2I2A8_BIFLN
metal-dependent proteases-like protein
Peptidase M22 {ECO:0000313|EMBL:KEY31366.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_021_000G1_scaffold_389_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18704..19258
-----------------
DNA (555bp)
protein (185aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CCK35112.1}; EC=2.3.1.128 {ECO:0000313|EMBL:CCK35112.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Acetyltransferase n=3 Tax=Bifidobacterium longum RepID=B3DRD7_BIFLD
rimI1; acetyltransferase
L2_021_000G1_scaffold_389_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


19255..20298
-----------------
DNA (1044bp)
protein (348aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=3 Tax=Bifidobacterium RepID=E4R2S2_BIFLM
metal-dependent protease
L2_021_000G1_scaffold_389_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21070..21759
-----------------
DNA (690bp)
protein (230aa)
Pitative peptidase n=10 Tax=Bifidobacterium RepID=V6XYY1_BIFLN
hypothetical protein
Peptidase M23 {ECO:0000313|EMBL:AIW43842.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_000G1_scaffold_389_20
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21837..23468)
-----------------
DNA (1632bp)
protein (544aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C5ECE6_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EFV37120.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L2_021_000G1_scaffold_389_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23717..24937)
-----------------
DNA (1221bp)
protein (407aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108, ECO:0000313|EMBL:CBK70449.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Isocitrate dehydrogenase [NADP] n=9 Tax=Bifidobacterium longum RepID=B3DRS5_BIFLD
icd; icd
L2_021_000G1_scaffold_389_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25065..26189
-----------------
DNA (1125bp)
protein (375aa)
IMP dehydrogenase family protein n=17 Tax=Bacteria RepID=D6ZUK8_BIFLJ
inositol-5-monophosphate dehydrogenase
IMP dehydrogenase family protein {ECO:0000313|EMBL:EEI80165.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_021_000G1_scaffold_389_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26352..26843
-----------------
DNA (492bp)
protein (164aa)
Uncharacterized protein n=8 Tax=Bifidobacterium longum RepID=B7GQR5_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ52145.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_021_000G1_scaffold_389_24
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26934..29021
-----------------
DNA (2088bp)
protein (696aa)
CaiC n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R2S8_BIFLM
caiC; caic
AMP-binding enzyme {ECO:0000313|EMBL:EFV37124.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_021_000G1_scaffold_389_25
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29028..29516
-----------------
DNA (489bp)
protein (163aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Peptide deformylase 2 n=18 Tax=Bifidobacterium RepID=DEF2_BIFLO
polypeptide deformylase
L2_021_000G1_scaffold_389_26
Bifidobacterium choerinum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


29874..30566
-----------------
DNA (693bp)
protein (231aa)
30S ribosomal protein S2 n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NTR1_9BIFI
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=35760 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium choerinum.;"
L2_021_000G1_scaffold_389_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30645..31496
-----------------
DNA (852bp)
protein (284aa)
Elongation factor Ts n=19 Tax=Bifidobacterium RepID=EFTS_BIFLD
elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_000G1_scaffold_389_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31670..32410
-----------------
DNA (741bp)
protein (247aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Uridylate kinase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZUK2_BIFLJ
uridylate kinase
L2_021_000G1_scaffold_389_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32487..33038
-----------------
DNA (552bp)
protein (184aa)
Ribosome-recycling factor n=16 Tax=Bifidobacterium RepID=RRF_BIFLD
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_021_000G1_scaffold_389_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33061..34047
-----------------
DNA (987bp)
protein (329aa)
CDP-diglyceride synthetase n=2 Tax=Bifidobacterium longum RepID=B3DRT5_BIFLD
cdsA; CDP-diglyceride synthetase
CDP-diglyceride synthetase {ECO:0000313|EMBL:ACD97854.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Displaying items 1-30 of 94 in total

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