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L2_021_000G1_scaffold_422

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_422_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..180)
DNA (180bp) protein (60aa)
UPF0109 protein FP2_26630 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K119_9FIRM
RNA-binding protein (KH domain)
UPF0109 protein FP2_26630 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(197..439)
DNA (243bp) protein (81aa)
30S ribosomal protein S16 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K118_9FIRM
SSU ribosomal protein S16P
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(526..1881)
DNA (1356bp) protein (452aa)
Signal recognition particle protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K117_9FIRM
signal recognition particle subunit FFH/SRP54 (srp54)
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1909..2292)
DNA (384bp) protein (128aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K116_9FIRM
hypothetical protein
UPF0122 protein FP2_26600 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_5
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2511..3419
DNA (909bp) protein (303aa)
cysteine synthase (EC:2.5.1.47)
Pyridoxal-phosphate dependent protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q6F6_9FIRM
Pyridoxal-phosphate dependent protein {ECO:0000313|EMBL:CDC28564.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_021_000G1_scaffold_422_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3441..4769
DNA (1329bp) protein (443aa)
Putative efflux protein, MATE family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K115_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBK99964.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4850..5914)
DNA (1065bp) protein (355aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473, ECO:0000313|EMBL:CBK99963.1}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473, ECO:0000313|EMBL:CBK99963.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K114_9FIRM
L2_021_000G1_scaffold_422_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5935..6852)
DNA (918bp) protein (306aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CBK99962.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CBK99962.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K113_9FIRM
L2_021_000G1_scaffold_422_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6869..7756)
DNA (888bp) protein (296aa)
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CBK99961.1}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CBK99961.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K112_9FIRM
L2_021_000G1_scaffold_422_10
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8066..8857)
DNA (792bp) protein (264aa)
Glycosyltransferase group 2 family protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QCZ0_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDC30939.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Predicted glycosyltransferases
L2_021_000G1_scaffold_422_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8872..11298)
DNA (2427bp) protein (809aa)
Predicted glycosyltransferases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K111_9FIRM
Predicted glycosyltransferases {ECO:0000313|EMBL:CBK99960.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Predicted glycosyltransferases
L2_021_000G1_scaffold_422_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11447..12664)
DNA (1218bp) protein (406aa)
SpoIID/LytB domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K110_9FIRM
SpoIID/LytB domain
SpoIID/LytB domain {ECO:0000313|EMBL:CBK99959.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12709..13500
DNA (792bp) protein (264aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K109_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK99958.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13497..13961
DNA (465bp) protein (155aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K108_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK99957.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14036..14611
DNA (576bp) protein (192aa)
Nitroreductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K106_9FIRM
Nitroreductase
Nitroreductase {ECO:0000313|EMBL:CBK99955.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15090..15935
DNA (846bp) protein (282aa)
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K105_9FIRM
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CBK99954.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16047..16811
DNA (765bp) protein (255aa)
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K104_9FIRM
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CBK99953.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16801..17565
DNA (765bp) protein (255aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNP0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFQ05284.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_021_000G1_scaffold_422_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17688..18512)
DNA (825bp) protein (275aa)
ABC-type uncharacterized transport system, ATPase component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K103_9FIRM
ABC-type uncharacterized transport system, ATPase component
ABC-type uncharacterized transport system, ATPase component {ECO:0000313|EMBL:CBK99952.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18514..19446)
DNA (933bp) protein (311aa)
ABC-type uncharacterized transport system, permease component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K102_9FIRM
ABC-type uncharacterized transport system, permease component
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:CBK99951.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19741..20838)
DNA (1098bp) protein (366aa)
ABC-type uncharacterized transport system, periplasmic component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K101_9FIRM
ABC-type uncharacterized transport system, periplasmic component
ABC-type uncharacterized transport system, periplasmic component {ECO:0000313|EMBL:CBK99950.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21291..22124)
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K100_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99949.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22118..22819)
DNA (702bp) protein (234aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z9_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBK99948.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22812..23192)
DNA (381bp) protein (127aa)
Transcriptional regulator, GntR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z8_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBK99947.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23341..24339
DNA (999bp) protein (333aa)
Predicted glycosyltransferases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z7_9FIRM
Predicted glycosyltransferases
Predicted glycosyltransferases {ECO:0000313|EMBL:CBK99946.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24401..25318)
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99945.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25423..25764)
DNA (342bp) protein (114aa)
Arsenate reductase and related proteins, glutaredoxin family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z5_9FIRM
Arsenate reductase and related proteins, glutaredoxin family
Arsenate reductase and related proteins, glutaredoxin family {ECO:0000313|EMBL:CBK99944.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25897..26082
DNA (186bp) protein (62aa)
Ferredoxin n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z4_9FIRM
Ferredoxin
Ferredoxin {ECO:0000313|EMBL:CBK99943.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_422_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26591..29176
DNA (2586bp) protein (862aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460, ECO:0000313|EMBL:CBK99942.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
DNA polymerase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z3_9FIRM
L2_021_000G1_scaffold_422_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


29181..30188
DNA (1008bp) protein (336aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z2_9FIRM
Displaying items 1-30 of 44 in total

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