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L2_021_000G1_scaffold_434

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_434_1
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(719..1126)
DNA (408bp) protein (136aa)
HK97 family phage prohead protease n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5X0_9FIRM
HK97 family phage prohead protease {ECO:0000313|EMBL:EHR38626.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L2_021_000G1_scaffold_434_2
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1331..1927)
DNA (597bp) protein (199aa)
Cytidylate kinase (EC:2.7.4.14)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR38625.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L2_021_000G1_scaffold_434_3
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1959..3302)
DNA (1344bp) protein (448aa)
L-fucose:H+ symporter permease n=2 Tax=Megamonas RepID=R6MQV0_9FIRM
L-fucose:H+ symporter permease {ECO:0000313|EMBL:CDB98314.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
fucP; L-fucose:H+ symporter permease
L2_021_000G1_scaffold_434_4
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3349..3789)
DNA (441bp) protein (147aa)
Fucose dissimilation pathway protein FucU (EC:5.1.3.-)
Uncharacterized protein n=2 Tax=Megamonas RepID=R6MVU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR38623.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L2_021_000G1_scaffold_434_5
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3783..5258)
DNA (1476bp) protein (492aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.5 2.7.1.51)
Rhamnulokinase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5W6_9FIRM
Rhamnulokinase {ECO:0000313|EMBL:EHR38622.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L2_021_000G1_scaffold_434_6
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5502..6185)
DNA (684bp) protein (228aa)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases (EC:4.1.2.17)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases {ECO:0000313|EMBL:CBL05952.1}; EC=4.1.2.17 {ECO:0000313|EMBL:CBL05952.1};; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases n=3 Tax=Megamonas RepID=D4KI73_9FIRM
L2_021_000G1_scaffold_434_7
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6225..8018)
DNA (1794bp) protein (598aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L-fucose isomerase (EC:5.3.1.25)
fucose isomerase n=1 Tax=Megamonas rupellensis RepID=UPI0003751F22
L2_021_000G1_scaffold_434_8
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8238..9116
DNA (879bp) protein (293aa)
AraC-type DNA-binding domain-containing proteins n=2 Tax=Megamonas RepID=D4KI76_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBL05955.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L2_021_000G1_scaffold_434_9
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9181..9438)
DNA (258bp) protein (86aa)
RNA-binding protein Hfq n=2 Tax=Megamonas RepID=H3K5W4_9FIRM
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
RNA-binding protein Hfq
L2_021_000G1_scaffold_434_10
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9541..10485)
DNA (945bp) protein (315aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
miaA; putative tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5W3_9FIRM
L2_021_000G1_scaffold_434_11
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10487..11164)
DNA (678bp) protein (226aa)
UPF0173 metal-dependent hydrolase HMPREF9454_00635 n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5W2_9FIRM
UPF0173 metal-dependent hydrolase HMPREF9454_00635 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Predicted Zn-dependent hydrolases of the beta-lactamase fold
L2_021_000G1_scaffold_434_12
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11186..12892)
DNA (1707bp) protein (569aa)
DNA repair protein RecN n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5W1_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
DNA repair protein RecN
L2_021_000G1_scaffold_434_13
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12907..13359)
DNA (453bp) protein (151aa)
Arginine repressor n=3 Tax=Megamonas RepID=D4KI81_9FIRM
transcriptional regulator, ArgR family
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L2_021_000G1_scaffold_434_14
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13356..13946)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR38615.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
L2_021_000G1_scaffold_434_15
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13991..14845)
DNA (855bp) protein (285aa)
Predicted sugar kinase (EC:2.7.1.23)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=2 Tax=Megamonas RepID=D4KI83_9FIRM
L2_021_000G1_scaffold_434_16
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14860..15669)
DNA (810bp) protein (270aa)
Hemolysin TlyA family protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5V7_9FIRM
Hemolysin TlyA family protein {ECO:0000313|EMBL:EHR38613.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hemolysin TlyA family protein
L2_021_000G1_scaffold_434_17
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15687..17564)
DNA (1878bp) protein (626aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
dxs; putative 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MI77_9FIRM
L2_021_000G1_scaffold_434_18
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17586..18464)
DNA (879bp) protein (293aa)
farnesyl-diphosphate synthase (EC:2.5.1.10)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR38611.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L2_021_000G1_scaffold_434_19
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18465..18704)
DNA (240bp) protein (80aa)
Exonuclease VII small subunit. (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Exodeoxyribonuclease 7 small subunit n=3 Tax=Megamonas RepID=D4KI88_9FIRM
L2_021_000G1_scaffold_434_20
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18715..19917)
DNA (1203bp) protein (401aa)
exodeoxyribonuclease VII, large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KI89_9FIRM
L2_021_000G1_scaffold_434_21
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19975..20370)
DNA (396bp) protein (132aa)
N utilization substance protein B homolog n=3 Tax=Megamonas RepID=D4KI90_9FIRM
transcription antitermination factor NusB
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L2_021_000G1_scaffold_434_22
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20389..20640)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5V0_9FIRM
Small integral membrane protein (DUF2273).
Uncharacterized protein {ECO:0000313|EMBL:EHR38635.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L2_021_000G1_scaffold_434_23
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20661..21236)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR38634.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L2_021_000G1_scaffold_434_24
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21257..21646)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5U8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR38633.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L2_021_000G1_scaffold_434_25
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21859..22416)
DNA (558bp) protein (186aa)
Elongation factor P n=2 Tax=Megamonas RepID=D4KI94_9FIRM
translation elongation factor P (EF-P)
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L2_021_000G1_scaffold_434_26
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22491..23570)
DNA (1080bp) protein (360aa)
Xaa-Pro dipeptidase n=1 Tax=Megamonas rupellensis RepID=UPI0003673728
Uncharacterized protein {ECO:0000313|EMBL:EHR38631.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Xaa-Pro aminopeptidase
L2_021_000G1_scaffold_434_27
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23574..24023)
DNA (450bp) protein (150aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5U5_9FIRM
L2_021_000G1_scaffold_434_28
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24329..24607)
DNA (279bp) protein (93aa)
Acylphosphatases (EC:3.6.1.7)
Acylphosphatases {ECO:0000313|EMBL:CBL05978.1}; EC=3.6.1.7 {ECO:0000313|EMBL:CBL05978.1};; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
Acylphosphatases n=2 Tax=Megamonas RepID=D4KI99_9FIRM
L2_021_000G1_scaffold_434_29
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24920..25873
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MR14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB98369.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
3-carboxy-cis,cis-muconate lactonizing enzyme.
L2_021_000G1_scaffold_434_30
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25904..27313
DNA (1410bp) protein (470aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5U1_9FIRM
Glucose-6-phosphate 1-dehydrogenase
Displaying items 1-30 of 43 in total

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