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L2_021_000G1_scaffold_439

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_439_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(304..783)
DNA (480bp) protein (160aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
ATP-dependent DNA helicase n=2 Tax=unclassified Lachnospiraceae RepID=E5XGC1_9FIRM
ATP-dependent DNA helicase {ECO:0000313|EMBL:EFV19665.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L2_021_000G1_scaffold_439_2
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1023..2591)
DNA (1569bp) protein (523aa)
SIR2-like domain protein n=27 Tax=Clostridium difficile RepID=T2W5D6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KJJ75429.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L2_021_000G1_scaffold_439_3
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2667..3161)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1J2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS37357.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
AcrR; transcriptional regulator
L2_021_000G1_scaffold_439_4
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(3176..3388)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N024_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF05946.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
N-6 DNA methylase
L2_021_000G1_scaffold_439_5
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3483..4316)
DNA (834bp) protein (278aa)
Alpha/beta fold family hydrolase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0U1_ROSHA
alpha/beta fold family hydrolase
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:AEN95935.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_021_000G1_scaffold_439_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4751..5221)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76316.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_021_000G1_scaffold_439_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5211..5423)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76317.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted transcriptional regulators
L2_021_000G1_scaffold_439_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5685..6695
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76318.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LacI family transcriptional regulator
L2_021_000G1_scaffold_439_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6695..8026
DNA (1332bp) protein (444aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEX2_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EES76319.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
MATE efflux family protein
L2_021_000G1_scaffold_439_10
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8099..9838)
DNA (1740bp) protein (580aa)
ABC transporter, ATP-binding protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G7D9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDR45593.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
ABC-type multidrug transport system, ATPase and permease components
L2_021_000G1_scaffold_439_11
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9840..11594)
DNA (1755bp) protein (585aa)
ABC transporter, ATP-binding protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G7E0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDR45594.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
ABC-type multidrug transport system, ATPase and permease components
L2_021_000G1_scaffold_439_12
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11813..12442)
DNA (630bp) protein (210aa)
Transcriptional regulator, TetR family n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G7E1_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDR45595.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Transcriptional regulator
L2_021_000G1_scaffold_439_13
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12549..13532)
DNA (984bp) protein (328aa)
BAAT/acyl-CoA thioester hydrolase C-terminal domain protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G7E2_9FIRM
BAAT/acyl-CoA thioester hydrolase C-terminal domain protein {ECO:0000313|EMBL:EDR45596.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
BAAT / Acyl-CoA thioester hydrolase C terminal.
L2_021_000G1_scaffold_439_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13555..14196)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76324.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L2_021_000G1_scaffold_439_15
unknown

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comp(14363..14485)
DNA (123bp) protein (41aa)

This feature has no annotations

L2_021_000G1_scaffold_439_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14494..16206)
DNA (1713bp) protein (571aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
glycogen/starch synthases, ADP-glucose type (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEX8_9FIRM
L2_021_000G1_scaffold_439_17
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16498..16701)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5GD85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY10772.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L2_021_000G1_scaffold_439_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16725..17312)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77468.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Cytidylate kinase
L2_021_000G1_scaffold_439_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17325..18692)
DNA (1368bp) protein (456aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEY0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EES76327.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative efflux protein, MATE family
L2_021_000G1_scaffold_439_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18833..19054)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76329.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_021_000G1_scaffold_439_21
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19291..20121)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F7A2E9
Transcriptional regulator LuxR family {ECO:0000313|EMBL:CCY31646.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L2_021_000G1_scaffold_439_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20512..21864)
DNA (1353bp) protein (451aa)
tail protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FAEF67
Uncharacterized protein {ECO:0000313|EMBL:EES76331.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Ig-like domain-containing surface protein
L2_021_000G1_scaffold_439_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22068..22814)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76332.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
conserved hypothetical protein
L2_021_000G1_scaffold_439_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22799..23758)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76333.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_021_000G1_scaffold_439_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24046..26562
DNA (2517bp) protein (839aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76334.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ATP-dependent transcriptional regulator-like protein
L2_021_000G1_scaffold_439_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26642..26914)
DNA (273bp) protein (91aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76335.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_021_000G1_scaffold_439_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26970..28454)
DNA (1485bp) protein (495aa)
Beta-fructosidases (levanase/invertase) (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEY9_9FIRM
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EES76336.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_021_000G1_scaffold_439_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28486..30165)
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76337.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_021_000G1_scaffold_439_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30185..31078)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76338.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_021_000G1_scaffold_439_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31091..32029)
DNA (939bp) protein (313aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76339.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Displaying items 1-30 of 40 in total

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