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L2_021_000G1_scaffold_465

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_465_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(114..1079)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7GCM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00459.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_021_000G1_scaffold_465_2
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1094..2128)
DNA (1035bp) protein (345aa)
HD domain protein n=2 Tax=Roseburia RepID=C7GCM1_9FIRM
Putative HD domain protein {ECO:0000313|EMBL:CDA56105.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
HD-GYP domain
L2_021_000G1_scaffold_465_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2156..2677)
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6B507_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13329.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_021_000G1_scaffold_465_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2725..3651)
DNA (927bp) protein (309aa)
ParB-like protein n=2 Tax=Roseburia intestinalis RepID=C7GCL9_9FIRM
ParB-like protein {ECO:0000313|EMBL:EEV00456.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ParB-like partition proteins
L2_021_000G1_scaffold_465_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3644..4411)
DNA (768bp) protein (256aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=2 Tax=Roseburia RepID=C7GCL8_9FIRM
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:CDA56102.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ATPases involved in chromosome partitioning
L2_021_000G1_scaffold_465_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6151..6792)
DNA (642bp) protein (214aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Roseburia RepID=D4KTA9_9FIRM
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:CDA56099.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_465_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6808..7812)
DNA (1005bp) protein (335aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase. (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase n=2 Tax=Roseburia RepID=D4KZW9_9FIRM
L2_021_000G1_scaffold_465_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7987..8958
DNA (972bp) protein (324aa)
Hydrolase alpha/beta fold family n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BS49_9FIRM
Hydrolase alpha/beta fold family {ECO:0000313|EMBL:CDA56097.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_021_000G1_scaffold_465_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9138..9854)
DNA (717bp) protein (239aa)
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Ribosomal RNA small subunit methyltransferase G n=4 Tax=Roseburia RepID=D4KZX0_9FIRM
L2_021_000G1_scaffold_465_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9961..11934)
DNA (1974bp) protein (658aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AYG2_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
glucose-inhibited division protein A
L2_021_000G1_scaffold_465_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12078..13451)
DNA (1374bp) protein (458aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
tRNA modification GTPase MnmE n=2 Tax=Roseburia RepID=D4KZX2_9FIRM
tRNA modification GTPase trmE
L2_021_000G1_scaffold_465_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13548..14174)
DNA (627bp) protein (209aa)
Predicted RNA-binding protein n=4 Tax=Roseburia RepID=D4KTA3_9FIRM
Predicted RNA-binding protein
Predicted RNA-binding protein {ECO:0000313|EMBL:CDA56092.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_465_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14197..15498)
DNA (1302bp) protein (434aa)
Membrane protein insertase YidC/Oxa1 family C-terminal domain n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BAJ8_9FIRM
Membrane protein insertase YidC/Oxa1 family C-terminal domain {ECO:0000313|EMBL:CDA56091.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L2_021_000G1_scaffold_465_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15751..16089)
DNA (339bp) protein (113aa)
ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Ribonuclease P protein component n=4 Tax=Roseburia RepID=D4KTA2_9FIRM
L2_021_000G1_scaffold_465_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17024..18439
DNA (1416bp) protein (472aa)
Chromosomal replication initiator protein DnaA n=4 Tax=Roseburia RepID=D4KTA0_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
chromosomal replication initiator protein DnaA
L2_021_000G1_scaffold_465_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18777..19889
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=2 Tax=Roseburia RepID=C7GCK5_9FIRM
L2_021_000G1_scaffold_465_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19953..20168
DNA (216bp) protein (72aa)
Uncharacterized conserved protein n=2 Tax=Roseburia intestinalis RepID=D4KT98_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL10100.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_465_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20165..21271
DNA (1107bp) protein (369aa)
DNA replication and repair protein RecF n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KT97_9FIRM
recF protein
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_465_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21276..23213
DNA (1938bp) protein (646aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
DNA gyrase subunit B n=3 Tax=Roseburia intestinalis RepID=D4KT96_9FIRM
L2_021_000G1_scaffold_465_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23303..25927
DNA (2625bp) protein (875aa)
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
DNA gyrase subunit A n=4 Tax=Roseburia RepID=D4KT95_9FIRM
L2_021_000G1_scaffold_465_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25961..27052
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZY3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12923.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_021_000G1_scaffold_465_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27284..28012
DNA (729bp) protein (243aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7GCJ8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10095.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_465_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28009..29622
DNA (1614bp) protein (538aa)
ABC-type multidrug transport system, ATPase and permease components n=3 Tax=Roseburia intestinalis RepID=D4KT92_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL10094.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_465_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29758..30201
DNA (444bp) protein (148aa)
Response regulator of the LytR/AlgR family n=4 Tax=Roseburia RepID=D4KT90_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CDA57550.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_465_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30256..30714
DNA (459bp) protein (153aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GCJ5_9FIRM
Protein of unknown function (DUF3021).
Uncharacterized protein {ECO:0000313|EMBL:CDA57549.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_465_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30857..33724
DNA (2868bp) protein (956aa)
exo-1,4-beta-glucosidase (EC:3.2.1.74 3.2.1.21)
Exo-1 4-beta-glucosidase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B042_9FIRM
Exo-1 4-beta-glucosidase {ECO:0000313|EMBL:CDA57548.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_465_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33980..34834
DNA (855bp) protein (285aa)
Putative pyrroline-5-carboxylate reductase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BWK1_9FIRM
Putative pyrroline-5-carboxylate reductase {ECO:0000313|EMBL:CDA57547.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_021_000G1_scaffold_465_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34837..35664
DNA (828bp) protein (276aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KT86_9FIRM
L2_021_000G1_scaffold_465_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35678..36523
DNA (846bp) protein (282aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=2 Tax=Roseburia RepID=C7GCJ0_9FIRM
L2_021_000G1_scaffold_465_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36537..36929
DNA (393bp) protein (131aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=4 Tax=Roseburia RepID=D4KT84_9FIRM
Displaying items 1-30 of 38 in total

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